C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cleavage and polyadenylation specific factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000034178 cpsf1 7955 - 19:12520943-12573746 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000024861 cpsf1-001 12520943-12573746 protein_coding
  ENSDART00000110017 cpsf1-201 12520943-12573308 protein_coding
  ENSDART00000110513 cpsf1-202 12520949-12573739 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000024861ENSDART00000110017ENSDART00000110513
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000024861 7.380±0.44 4.374±0.80 7.458±0.00 0.819±0.00 1.713±0.00
ENSDART00000110017 0.234±0.00 1.325±0.35 N/A N/A N/A
ENSDART00000110513 1.052±0.00 1.081±0.00 20.469±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LZ CIL_0006LZ_0001 CGP 19:12478642-12573746

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006378 IMP mRNA polyadenylation
GO:0060216 IMP definitive hemopoiesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000071894 CPSF1 cleavage and polyadenylation specific factor 1, 160kDa protein_coding Homo_sapiens
ENSMUSG00000034022 Cpsf1 cleavage and polyadenylation specific factor 1 protein_coding Mus_musculus

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