C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006LZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075405-ENSDARG00000034178 CGP 7955 19:12478642-12573746
GeneTranscriptPositionBiotype
ENSDARG00000034178 (cpsf1)
cleavage and polyadenylation specific factor 1 		ENSDART00000024861 (cpsf1-001) 12520943-12573746 protein_coding
ENSDART00000110017 (cpsf1-201) 12520943-12573308 protein_coding
ENSDART00000110513 (cpsf1-202) 12520949-12573739 protein_coding
ENSDARG00000075405 (adck5)
aarF domain containing kinase 5 		ENSDART00000114581 (adck5-201) 12478753-12517173 protein_coding
ENSDART00000145380 (adck5-001) 12478642-12517376 protein_coding
CIL_0006LZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173137-ENSG00000071894 CGP 9606 8:144373101-144409349
GeneTranscriptPositionBiotype
ENSG00000071894 (CPSF1)
cleavage and polyadenylation specific factor 1, 160kDa 		ENST00000526271 (CPSF1-005) 144393699-144394716 retained_intron
ENST00000527827 (CPSF1-009) 144396015-144396730 retained_intron
ENST00000527916 (CPSF1-011) 144398523-144399346 retained_intron
ENST00000529288 (CPSF1-007) 144395313-144395979 retained_intron
ENST00000531042 (CPSF1-015) 144394769-144409181 nonsense_mediated_decay
ENST00000531480 (CPSF1-010) 144393229-144394416 retained_intron
ENST00000531727 (CPSF1-012) 144393229-144394441 protein_coding
ENST00000532560 (CPSF1-006) 144399800-144400986 retained_intron
ENST00000532725 (CPSF1-004) 144393565-144394237 retained_intron
ENST00000532935 (CPSF1-013) 144393883-144394761 protein_coding
ENST00000533492 (CPSF1-008) 144399220-144399807 retained_intron
ENST00000616140 (CPSF1-201) 144393231-144409349 protein_coding
ENST00000620219 (CPSF1-001) 144393318-144409288 protein_coding
ENST00000622776 (CPSF1-003) 144399809-144401675 retained_intron
ENSG00000173137 (ADCK5)
aarF domain containing kinase 5 		ENST00000308860 (ADCK5-001) 144374052-144393236 protein_coding
ENST00000525136 (ADCK5-004) 144374055-144379421 processed_transcript
ENST00000526231 (ADCK5-009) 144373837-144391710 processed_transcript
ENST00000526833 (ADCK5-005) 144374076-144391055 nonsense_mediated_decay
ENST00000529654 (ADCK5-003) 144374046-144393242 nonsense_mediated_decay
ENST00000532190 (ADCK5-006) 144374061-144390884 retained_intron
ENST00000533715 (ADCK5-007) 144374042-144391276 nonsense_mediated_decay
ENST00000534714 (ADCK5-008) 144373101-144391064 processed_transcript
CIL_0006LZ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022550-ENSMUSG00000034022 CGP 10090 15:76576358-76607591
GeneTranscriptPositionBiotype
ENSMUSG00000034022 (Cpsf1)
cleavage and polyadenylation specific factor 1 		ENSMUST00000071898 (Cpsf1-201) 76595809-76607591 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006LZ_0001ENSDARG00000034178ENSDART00000024861ENSDART00000110017ENSDART00000110513ENSDARG00000075405ENSDART00000114581ENSDART00000145380CIL_0006LZ_0002ENSG00000071894ENST00000526271ENST00000527827ENST00000527916ENST00000529288ENST00000531042ENST00000531480ENST00000531727ENST00000532560ENST00000532725ENST00000532935ENST00000533492ENST00000616140ENST00000620219ENST00000622776ENSG00000173137ENST00000308860ENST00000525136ENST00000526231ENST00000526833ENST00000529654ENST00000532190ENST00000533715ENST00000534714CIL_0006LZ_0003ENSMUSG00000034022ENSMUST00000071898
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006LZ_0001ENSDARG00000034178ENSDART00000024861ENSDART00000110017ENSDART00000110513ENSDARG00000075405ENSDART00000114581ENSDART00000145380CIL_0006LZ_0002ENSG00000071894ENST00000526271ENST00000527916ENST00000531042ENST00000532935ENST00000616140ENST00000620219ENSG00000173137ENST00000308860ENST00000534714CIL_0006LZ_0003ENSMUSG00000034022ENSMUST00000071898
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000034178 ENSDART00000024861 N/A N/A N/A 7.380±0.44 N/A N/A 4.374±0.80 7.458±0.00 0.819±0.00 N/A 1.713±0.00 N/A N/A N/A
ENSDART00000110017 N/A N/A N/A 0.234±0.00 N/A N/A 1.325±0.35 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000110513 N/A N/A N/A 1.052±0.00 N/A N/A 1.081±0.00 20.469±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000075405 ENSDART00000114581 N/A N/A N/A N/A N/A N/A 3.013±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000145380 N/A N/A N/A 2.523±0.78 N/A N/A 9.317±4.90 2.723±0.81 0.699±0.00 N/A 0.694±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071894 ENST00000526271 N/A N/A N/A 1.387±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527916 N/A N/A 1.888±0.00 N/A N/A 5.447±0.00 N/A N/A N/A N/A N/A 4.550±0.00 N/A N/A
ENST00000529288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531042 N/A N/A 1.304±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.815±0.00 N/A N/A N/A
ENST00000533492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616140 5.977±0.00 N/A 0.953±0.00 0.280±0.00 3.557±2.92 5.524±4.70 1.695±0.92 2.120±0.71 1.102±0.00 3.745±0.00 14.591±0.00 20.299±10.63 14.195±1.52 28.332±5.51
ENST00000620219 6.116±0.00 12.762±0.00 N/A 2.843±2.04 3.967±1.39 2.266±0.46 2.925±0.00 2.261±1.58 3.211±1.96 3.050±2.10 0.455±0.00 9.529±0.00 N/A 14.193±2.28
ENST00000622776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173137 ENST00000308860 N/A N/A N/A 0.643±0.00 N/A N/A N/A 1.734±0.00 N/A N/A 0.344±0.00 N/A N/A N/A
ENST00000525136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.835±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034022 ENSMUST00000071898 25.224±7.79 39.878±1.63 20.338±0.97 28.419±8.65 26.191±6.31 26.221±1.58 11.129±0.84 18.175±1.79 19.056±3.19 26.046±1.78 6.590±0.65 36.250±7.62 16.259±3.30 20.374±5.76

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