C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protocadherin 19
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000034344 pcdh19 7955 - 14:41607082-41692874 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000149443 pcdh19-001 41607082-41692874 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000149443
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000149443 28.302±5.02 0.866±0.37 0.339±0.08 0.018±0.00 1.444±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YN CIL_0000YN_0001 CGP 14:41607082-42044114

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001841 IMP neural tube formation
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007156 IEA homophilic cell adhesion
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0048854 IMP brain morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165194 PCDH19 protocadherin 19 protein_coding Homo_sapiens
ENSMUSG00000051323 Pcdh19 protocadherin 19 protein_coding Mus_musculus

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