C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000YN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034344-ENSDARG00000052615 CGP 7955 14:41607082-42044114
GeneTranscriptPositionBiotype
ENSDARG00000034344 (pcdh19)
protocadherin 19
ENSDART00000149443 (pcdh19-001) 41607082-41692874 protein_coding
ENSDARG00000052615 (tnmd)
tenomodulin
ENSDART00000074506 (tnmd-201) 41963192-42044114 protein_coding
CIL_0000YN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165194-ENSG00000000005 CGP 9606 X:100291644-100599885
GeneTranscriptPositionBiotype
ENSG00000000005 (TNMD)
tenomodulin
ENST00000373031 (TNMD-001) 100584802-100599885 protein_coding
ENST00000485971 (TNMD-002) 100593624-100597531 processed_transcript
ENSG00000165194 (PCDH19)
protocadherin 19
ENST00000255531 (PCDH19-001) 100291646-100408597 protein_coding
ENST00000373034 (PCDH19-002) 100291644-100410273 protein_coding
ENST00000420881 (PCDH19-004) 100291644-100408597 protein_coding
ENST00000464981 (PCDH19-003) 100291647-100296300 nonsense_mediated_decay
CIL_0000YN_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051323-ENSMUSG00000031250 CGP 10090 X:133582863-133865577
GeneTranscriptPositionBiotype
ENSMUSG00000031250 (Tnmd)
tenomodulin
ENSMUST00000033602 (Tnmd-001) 133850980-133865577 protein_coding
ENSMUSG00000051323 (Pcdh19)
protocadherin 19
ENSMUST00000060309 (Pcdh19-002) 133587610-133685893 protein_coding
ENSMUST00000149154 (Pcdh19-001) 133582876-133688987 protein_coding
ENSMUST00000167944 (Pcdh19-201) 133582863-133688993 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000YN_0001ENSDARG00000034344ENSDART00000149443ENSDARG00000052615ENSDART00000074506CIL_0000YN_0002ENSG00000000005ENST00000373031ENST00000485971ENSG00000165194ENST00000255531ENST00000373034ENST00000420881ENST00000464981CIL_0000YN_0003ENSMUSG00000031250ENSMUST00000033602ENSMUSG00000051323ENSMUST00000060309ENSMUST00000149154ENSMUST00000167944
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000YN_0001ENSDARG00000034344ENSDART00000149443ENSDARG00000052615ENSDART00000074506CIL_0000YN_0002ENSG00000000005ENST00000373031ENST00000485971ENSG00000165194ENST00000255531ENST00000373034ENST00000420881ENST00000464981CIL_0000YN_0003ENSMUSG00000031250ENSMUST00000033602ENSMUSG00000051323ENSMUST00000060309ENSMUST00000149154ENSMUST00000167944
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000034344 ENSDART00000149443 N/A N/A N/A 28.302±5.02 N/A N/A 0.866±0.37 0.339±0.08 0.018±0.00 N/A 1.444±0.00 N/A N/A N/A
ENSDARG00000052615 ENSDART00000074506 N/A N/A N/A 0.612±0.38 N/A N/A 0.400±0.24 1.253±0.25 0.149±0.00 N/A 3.715±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000000005 ENST00000373031 N/A 2.214±0.00 N/A 0.075±0.00 9.625±9.44 N/A N/A 0.029±0.00 N/A 0.058±0.00 0.067±0.04 0.328±0.04 0.420±0.22 0.157±0.10
ENST00000485971 N/A N/A N/A N/A 0.553±0.00 N/A 0.063±0.00 0.173±0.00 0.422±0.00 N/A N/A 1.067±0.00 N/A N/A
ENSG00000165194 ENST00000255531 N/A 0.113±0.00 0.055±0.00 1.792±0.28 0.895±0.74 N/A 0.113±0.00 0.023±0.00 0.002±0.00 0.041±0.03 0.018±0.00 0.094±0.08 0.031±0.03 0.324±0.00
ENST00000373034 0.526±0.00 N/A N/A 0.935±0.25 0.211±0.17 N/A 0.044±0.02 N/A 0.180±0.00 N/A 0.055±0.00 0.073±0.00 N/A N/A
ENST00000420881 1.107±0.00 0.353±0.00 0.055±0.00 0.699±0.08 0.159±0.00 0.476±0.00 0.061±0.00 0.023±0.00 0.218±0.22 0.042±0.03 0.019±0.00 0.100±0.12 0.031±0.03 0.777±0.00
ENST00000464981 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.204±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031250 ENSMUST00000033602 N/A N/A 0.020±0.01 0.390±0.32 0.403±0.25 N/A 0.063±0.04 0.065±0.00 0.137±0.24 0.065±0.02 2.933±1.05 N/A 0.053±0.02 N/A
ENSMUSG00000051323 ENSMUST00000060309 1.168±0.27 0.948±0.00 N/A 2.624±0.00 1.877±0.74 0.306±0.07 0.670±0.17 0.190±0.04 0.020±0.00 N/A N/A 0.367±0.21 N/A 0.068±0.04
ENSMUST00000149154 N/A N/A 0.111±0.05 0.800±0.15 0.543±0.10 N/A N/A N/A N/A 0.611±0.00 0.089±0.00 0.177±0.00 0.085±0.03 N/A
ENSMUST00000167944 1.136±0.51 0.889±0.67 0.413±0.07 3.591±1.32 0.955±0.56 0.209±0.03 0.516±0.18 0.205±0.06 0.028±0.02 0.399±0.19 0.267±0.06 0.281±0.19 0.239±0.08 0.018±0.01

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