C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpain, small subunit 1 a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000035329 capns1a 7955 + 5:38254980-38265857 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000015240 capns1a-004 38255685-38265857 protein_coding
  ENSDART00000125653 capns1a-001 38261221-38265857 protein_coding
  ENSDART00000131339 capns1a-002 38254980-38265857 protein_coding
  ENSDART00000140676 capns1a-005 38261278-38265395 processed_transcript
  ENSDART00000141440 capns1a-003 38255072-38261872 processed_transcript
  ENSDART00000144932 capns1a-006 38255066-38264336 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000015240ENSDART00000125653ENSDART00000131339ENSDART00000140676
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000015240 N/A 13.233±0.00 N/A N/A N/A
ENSDART00000125653 21.985±11.41 17.491±0.00 N/A N/A N/A
ENSDART00000131339 23.381±2.42 54.246±22.64 31.143±7.07 1.364±0.00 16.898±0.00
ENSDART00000140676 N/A N/A N/A 0.608±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000126247 CAPNS1 calpain, small subunit 1 protein_coding Homo_sapiens
ENSG00000256812 CAPNS2 calpain, small subunit 2 protein_coding Homo_sapiens
ENSMUSG00000001794 Capns1 calpain, small subunit 1 protein_coding Mus_musculus
ENSMUSG00000078144 Capns2 calpain, small subunit 2 protein_coding Mus_musculus

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