C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: replication factor C (activator 1) 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000035634 rfc5 7955 + 5:13731093-13752132 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000051670 rfc5-001 13731093-13752132 protein_coding
  ENSDART00000131644 rfc5-003 13731169-13739480 retained_intron
  ENSDART00000140559 rfc5-002 13732802-13744104 processed_transcript
  ENSDART00000140949 rfc5-004 13743848-13752004 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000051670ENSDART00000140949
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000051670 7.211±0.75 8.041±1.64 9.955±2.39 0.469±0.00 3.035±0.00
ENSDART00000140949 8.981±0.61 31.875±1.50 49.819±3.91 0.292±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QL CIL_0001QL_0001 CGP 5:13731093-13762969

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003677 IEA DNA binding
GO:0005524 IEA ATP binding
GO:0006260 IEA DNA replication
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0009378 IEA four-way junction helicase activity
GO:0017111 IEA nucleoside-triphosphatase activity
GO:0060041 IMP retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000111445 RFC5 replication factor C (activator 1) 5, 36.5kDa protein_coding Homo_sapiens
ENSMUSG00000029363 Rfc5 replication factor C (activator 1) 5 protein_coding Mus_musculus

Loading