C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: replication factor C (activator 1) 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029363 Rfc5 10090 - 5:117378103-117389047 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000086461 Rfc5-001 117378103-117389047 protein_coding
  ENSMUST00000111953 Rfc5-003 117386281-117389045 protein_coding
  ENSMUST00000123392 Rfc5-006 117379841-117380216 processed_transcript
  ENSMUST00000126262 Rfc5-004 117381716-117386831 retained_intron
  ENSMUST00000129369 Rfc5-005 117379617-117380851 retained_intron
  ENSMUST00000150962 Rfc5-002 117378405-117389022 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086461ENSMUST00000126262
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086461 10.134±2.43 15.449±0.46 8.650±0.75 15.553±2.06 10.641±1.84 11.534±1.18 7.633±0.51 15.088±0.63 11.324±4.13 9.550±1.48 6.356±0.31 12.687±3.52 12.434±6.99 4.439±0.11
ENSMUST00000126262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.622±0.00 N/A 2.427±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005663 IEA DNA replication factor C complex
GO:0006260 IEA DNA replication

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035634 rfc5 replication factor C (activator 1) 5 protein_coding Danio_rerio
ENSG00000111445 RFC5 replication factor C (activator 1) 5, 36.5kDa protein_coding Homo_sapiens

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