C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001QL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035634-ENSDARG00000058608 CGP 7955 5:13731093-13762969
GeneTranscriptPositionBiotype
ENSDARG00000035634 (rfc5)
replication factor C (activator 1) 5
ENSDART00000051670 (rfc5-001) 13731093-13752132 protein_coding
ENSDART00000131644 (rfc5-003) 13731169-13739480 retained_intron
ENSDART00000140559 (rfc5-002) 13732802-13744104 processed_transcript
ENSDART00000140949 (rfc5-004) 13743848-13752004 retained_intron
ENSDARG00000058608 (wsb2)
WD repeat and SOCS box-containing 2
ENSDART00000081499 (wsb2-201) 13752264-13762705 protein_coding
ENSDART00000133587 (wsb2-001) 13751951-13762969 protein_coding
CIL_0001QL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000111445-ENSG00000176871 CGP 9606 12:118013588-118062430
GeneTranscriptPositionBiotype
ENSG00000111445 (RFC5)
replication factor C (activator 1) 5, 36.5kDa
ENST00000392542 (RFC5-001) 118016722-118032234 protein_coding
ENST00000420967 (RFC5-004) 118016704-118022314 protein_coding
ENST00000449641 (RFC5-006) 118013588-118024981 protein_coding
ENST00000454402 (RFC5-002) 118016710-118031792 protein_coding
ENST00000472603 (RFC5-005) 118024916-118027392 retained_intron
ENST00000484086 (RFC5-007) 118016704-118020960 protein_coding
ENST00000535092 (RFC5-008) 118016729-118019754 protein_coding
ENST00000537315 (RFC5-003) 118016701-118024996 protein_coding
ENST00000543153 (RFC5-009) 118026890-118033130 processed_transcript
ENSG00000176871 (WSB2)
WD repeat and SOCS box containing 2
ENST00000315436 (WSB2-001) 118032907-118061190 protein_coding
ENST00000441406 (WSB2-002) 118034121-118062174 protein_coding
ENST00000535496 (WSB2-006) 118034196-118052604 protein_coding
ENST00000536602 (WSB2-007) 118042456-118061112 retained_intron
ENST00000536738 (WSB2-008) 118036338-118061140 processed_transcript
ENST00000537945 (WSB2-005) 118036441-118062410 protein_coding
ENST00000540129 (WSB2-003) 118034675-118061089 retained_intron
ENST00000542726 (WSB2-004) 118042878-118062430 processed_transcript
ENST00000543186 (WSB2-009) 118035077-118042878 nonsense_mediated_decay
ENST00000543218 (WSB2-010) 118034165-118061114 nonsense_mediated_decay
ENST00000544233 (WSB2-201) 118032694-118061211 protein_coding
ENST00000614776 (WSB2-011) 118035698-118036384 retained_intron
ENSG00000276292 (RP11-33N14.5)
ENST00000621854 (RP11-33N14.5-001) 118037869-118038081 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QL_0001ENSDARG00000035634ENSDART00000051670ENSDART00000131644ENSDART00000140559ENSDART00000140949ENSDARG00000058608ENSDART00000081499ENSDART00000133587CIL_0001QL_0002ENSG00000111445ENST00000392542ENST00000420967ENST00000449641ENST00000454402ENST00000472603ENST00000484086ENST00000535092ENST00000537315ENST00000543153ENSG00000176871ENST00000315436ENST00000441406ENST00000535496ENST00000536602ENST00000536738ENST00000537945ENST00000540129ENST00000542726ENST00000543186ENST00000543218ENST00000544233ENST00000614776ENSG00000276292ENST00000621854
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QL_0001ENSDARG00000035634ENSDART00000051670ENSDART00000140949ENSDARG00000058608ENSDART00000081499ENSDART00000133587CIL_0001QL_0002ENSG00000111445ENST00000392542ENST00000454402ENSG00000176871ENST00000315436ENST00000441406ENST00000537945ENST00000543218ENST00000544233ENSG00000276292ENST00000621854
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035634 ENSDART00000051670 N/A N/A N/A 7.211±0.75 N/A N/A 8.041±1.64 9.955±2.39 0.469±0.00 N/A 3.035±0.00 N/A N/A N/A
ENSDART00000131644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140949 N/A N/A N/A 8.981±0.61 N/A N/A 31.875±1.50 49.819±3.91 0.292±0.00 N/A N/A N/A N/A N/A
ENSDARG00000058608 ENSDART00000081499 N/A N/A N/A N/A N/A N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A
ENSDART00000133587 N/A N/A N/A 5.091±0.43 N/A N/A 6.206±0.00 17.038±3.40 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111445 ENST00000392542 N/A 3.787±0.00 0.829±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.599±0.17 N/A N/A
ENST00000420967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.360±0.00 4.874±1.85 4.173±0.00
ENST00000472603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176871 ENST00000315436 19.800±0.00 13.764±0.00 3.426±0.00 22.624±7.56 12.200±8.75 12.981±6.17 8.575±5.15 12.551±10.52 9.915±6.03 9.123±7.72 14.671±10.97 11.202±2.63 7.833±1.92 11.314±5.55
ENST00000441406 N/A N/A N/A 29.069±0.00 N/A N/A 8.667±5.44 2.168±0.00 N/A N/A 5.322±0.00 N/A N/A N/A
ENST00000535496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.714±0.00
ENST00000540129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543218 N/A N/A N/A N/A 5.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544233 N/A N/A N/A 9.987±0.00 N/A N/A 1.128±0.00 5.795±0.00 5.053±0.00 5.488±0.00 N/A N/A 2.860±0.00 N/A
ENST00000614776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000276292 ENST00000621854 N/A 0.660±0.00 N/A 0.107±0.00 0.309±0.00 N/A 0.049±0.00 0.212±0.00 N/A N/A N/A 0.470±0.00 0.324±0.00 0.444±0.09

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