C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type I, alpha 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000035809 col1a1b 7955 - 12:3687446-3725230 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000015092 col1a1b-001 3687446-3725230 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000015092
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000015092 0.873±0.36 12.777±12.75 15.040±4.55 0.290±0.00 39.740±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X4 CIL_0004X4_0001 CGP 12:3669968-3725230

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005515 IEA protein binding
GO:0005581 IEA collagen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000108821 COL1A1 collagen, type I, alpha 1 protein_coding Homo_sapiens
ENSMUSG00000001506 Col1a1 collagen, type I, alpha 1 protein_coding Mus_musculus

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