C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000036251 smarcc1b 7955 - 19:18923989-18960930 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000085619 smarcc1b-201 18924323-18960911 protein_coding
  ENSDART00000104385 smarcc1b-001 18923989-18960930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000085619ENSDART00000104385
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000085619 N/A N/A 0.336±0.00 N/A N/A
ENSDART00000104385 2.784±2.48 2.361±0.82 3.103±2.21 0.245±0.00 0.935±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000350 CIL_000350_0002 CGP 19:18859894-18960930

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000173473 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein_coding Homo_sapiens
ENSMUSG00000032481 Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 protein_coding Mus_musculus

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