C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: actin, alpha 1a, skeletal muscle
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000036371 acta1a 7955 + 1:54512688-54520286 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000052838 acta1a-001 54512688-54520286 protein_coding
  ENSDART00000139625 acta1a-002 54512754-54515262 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000052838ENSDART00000139625
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000052838 0.454±0.47 194.568±183.40 1.569±0.00 2.719±0.00 3.740±0.00
ENSDART00000139625 N/A 1.463±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000159251 ACTC1 actin, alpha, cardiac muscle 1 protein_coding Homo_sapiens
ENSMUSG00000068614 Actc1 actin, alpha, cardiac muscle 1 protein_coding Mus_musculus

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