C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: rhomboid 5 homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000036541 rhbdf1 7955 - 3:55748003-55844699 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000053095 rhbdf1-001 55748003-55844606 protein_coding
  ENSDART00000145766 rhbdf1-002 55773327-55844699 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000053095
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000053095 3.081±0.99 6.219±4.48 4.548±1.18 2.259±0.00 4.568±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007A5 CIL_0007A5_0001 CGP 3:55748003-55894822

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 ISS Golgi membrane
GO:0004252 IEA serine-type endopeptidase activity
GO:0005783 IEA endoplasmic reticulum
GO:0005789 ISS endoplasmic reticulum membrane
GO:0005794 IEA Golgi apparatus
GO:0006508 IEA proteolysis
GO:0006810 IEA transport
GO:0008283 ISS cell proliferation
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016477 ISS cell migration
GO:0019838 IEA growth factor binding
GO:0042058 ISS regulation of epidermal growth factor receptor signaling pathway
GO:0050709 ISS negative regulation of protein secretion
GO:0061136 ISS regulation of proteasomal protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000007384 RHBDF1 rhomboid 5 homolog 1 (Drosophila) protein_coding Homo_sapiens
ENSMUSG00000020282 Rhbdf1 rhomboid family 1 (Drosophila) protein_coding Mus_musculus

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