C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007A5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000036541-ENSDARG00000069729 CGP 7955 3:55748003-55894822
GeneTranscriptPositionBiotype
ENSDARG00000036541 (rhbdf1)
rhomboid 5 homolog 1 (Drosophila) 		ENSDART00000053095 (rhbdf1-001) 55748003-55844606 protein_coding
ENSDART00000145766 (rhbdf1-002) 55773327-55844699 protein_coding
ENSDARG00000069729 (mpg)
N-methylpurine-DNA glycosylase 		ENSDART00000132587 (mpg-001) 55883357-55894822 protein_coding
CIL_0007A5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000007384-ENSG00000103152 CGP 9606 16:58059-85853
GeneTranscriptPositionBiotype
ENSG00000007384 (RHBDF1)
rhomboid 5 homolog 1 (Drosophila) 		ENST00000262316 (RHBDF1-001) 58059-72631 protein_coding
ENST00000417043 (RHBDF1-005) 62973-65037 nonsense_mediated_decay
ENST00000419764 (RHBDF1-012) 63743-65039 protein_coding
ENST00000428730 (RHBDF1-013) 58062-65039 nonsense_mediated_decay
ENST00000448893 (RHBDF1-008) 58137-59762 protein_coding
ENST00000450643 (RHBDF1-010) 63157-76355 protein_coding
ENST00000472390 (RHBDF1-011) 64552-76341 retained_intron
ENST00000482904 (RHBDF1-009) 61425-62206 retained_intron
ENST00000486045 (RHBDF1-007) 58974-60193 retained_intron
ENST00000487201 (RHBDF1-003) 63037-72621 retained_intron
ENST00000493647 (RHBDF1-006) 59233-60680 retained_intron
ENSG00000278995 (Z69720.3)
 ENST00000624755 (Z69720.3-001) 74683-74961 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007A5_0001ENSDARG00000036541ENSDART00000053095ENSDART00000145766ENSDARG00000069729ENSDART00000132587CIL_0007A5_0002ENSG00000007384ENST00000262316ENST00000417043ENST00000419764ENST00000428730ENST00000448893ENST00000450643ENST00000472390ENST00000482904ENST00000486045ENST00000487201ENST00000493647ENSG00000278995ENST00000624755
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007A5_0001ENSDARG00000036541ENSDART00000053095ENSDARG00000069729ENSDART00000132587CIL_0007A5_0002ENSG00000007384ENST00000262316ENST00000428730ENST00000448893ENST00000450643ENST00000482904ENST00000493647ENSG00000278995ENST00000624755
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036541 ENSDART00000053095 N/A N/A N/A 3.081±0.99 N/A N/A 6.219±4.48 4.548±1.18 2.259±0.00 N/A 4.568±0.00 N/A N/A N/A
ENSDART00000145766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000069729 ENSDART00000132587 N/A N/A N/A 1.147±0.18 N/A N/A 0.770±0.11 3.779±1.92 0.071±0.00 N/A 0.534±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000007384 ENST00000262316 8.188±0.00 7.414±0.00 0.187±0.00 1.520±0.00 7.065±0.00 1.383±0.00 1.251±1.13 4.220±0.00 0.269±0.00 8.702±0.00 1.942±0.00 10.672±8.42 13.642±6.22 3.764±0.00
ENST00000417043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428730 N/A N/A N/A 0.582±0.06 2.312±0.00 1.774±1.58 1.472±0.00 1.945±0.00 0.701±0.00 8.400±0.00 1.806±0.11 9.784±3.89 7.383±2.19 2.631±0.00
ENST00000448893 N/A N/A 1.900±0.00 1.292±0.00 5.072±0.00 0.815±0.00 1.809±0.52 0.955±0.00 1.128±0.60 11.667±0.00 N/A 9.546±5.06 20.881±0.00 2.076±0.00
ENST00000450643 N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000472390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482904 N/A N/A 1.584±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493647 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.127±0.00 N/A N/A N/A N/A
ENSG00000278995 ENST00000624755 N/A 0.074±0.00 N/A 0.352±0.00 0.078±0.00 N/A 0.136±0.00 0.370±0.00 N/A 0.518±0.00 N/A 0.280±0.02 0.235±0.00 0.469±0.00

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