C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000037350 rpl9 7955 - 1:22043597-22048598 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000054338 rpl9-001 22043597-22048598 protein_coding
  ENSDART00000054340 rpl9-002 22043821-22048568 protein_coding
  ENSDART00000122877 rpl9-005 22043953-22048134 retained_intron
  ENSDART00000130277 rpl9-004 22043824-22048519 protein_coding
  ENSDART00000133195 rpl9-006 22044982-22045885 retained_intron
  ENSDART00000147800 rpl9-003 22043821-22048487 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000054338ENSDART00000054340ENSDART00000130277ENSDART00000133195ENSDART00000147800
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000054338 52.772±37.88 234.643±195.34 207.933±272.44 306.993±0.00 201.462±0.00
ENSDART00000054340 N/A 488.647±115.74 N/A N/A N/A
ENSDART00000130277 144.908±20.24 678.682±45.38 983.944±0.00 288.294±0.00 430.832±0.00
ENSDART00000133195 0.462±0.13 N/A N/A N/A N/A
ENSDART00000147800 0.968±0.36 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TV CIL_0002TV_0001 CGP 1:22043597-22057562

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0019843 IEA rRNA binding
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163682 RPL9 ribosomal protein L9 protein_coding Homo_sapiens
ENSMUSG00000047215 Rpl9 ribosomal protein L9 protein_coding Mus_musculus
ENSMUSG00000062456 Rpl9-ps6 ribosomal protein L9, pseudogene 6 protein_coding Mus_musculus
ENSMUSG00000081906 Rpl9-ps1 ribosomal protein L9, pseudogene 1 protein_coding Mus_musculus

Loading