C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: structure specific recognition protein 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000037397 ssrp1a 7955 - 14:22983713-23018499 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000106155 ssrp1a-201 22983716-23018499 protein_coding
  ENSDART00000137795 ssrp1a-001 22983713-23018499 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000106155ENSDART00000137795
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000106155 0.655±0.26 1.298±0.96 6.024±0.35 0.870±0.00 0.580±0.00
ENSDART00000137795 1.003±1.06 0.624±0.57 6.381±0.00 0.869±0.00 0.579±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NZ CIL_0002NZ_0001 CGP 14:22947526-23018499

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0051726 IMP regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000149136 SSRP1 structure specific recognition protein 1 protein_coding Homo_sapiens
ENSMUSG00000027067 Ssrp1 structure specific recognition protein 1 protein_coding Mus_musculus

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