C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002NZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000010477-ENSDARG00000037397 CGP 7955 14:22947526-23018499
GeneTranscriptPositionBiotype
ENSDARG00000010477 (p2rx3a)
purinergic receptor P2X, ligand-gated ion channel, 3a 		ENSDART00000021417 (p2rx3a-001) 22947526-22962979 protein_coding
ENSDARG00000037397 (ssrp1a)
structure specific recognition protein 1a 		ENSDART00000106155 (ssrp1a-201) 22983716-23018499 protein_coding
ENSDART00000137795 (ssrp1a-001) 22983713-23018499 protein_coding
ENSDARG00000037398 (zgc:113229)
zgc:113229 		ENSDART00000054417 (zgc:113229-001) 22937598-22945672 protein_coding
ENSDART00000123225 (zgc:113229-201) 22937836-22947677 protein_coding
ENSDART00000131258 (zgc:113229-002) 22937998-22942809 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0002NZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027071-ENSMUSG00000027067 CGP 10090 2:84998583-85047109
GeneTranscriptPositionBiotype
ENSMUSG00000027067 (Ssrp1)
structure specific recognition protein 1 		ENSMUST00000077798 (Ssrp1-001) 85037234-85047109 protein_coding
ENSMUST00000123467 (Ssrp1-003) 85037453-85039271 processed_transcript
ENSMUST00000127069 (Ssrp1-008) 85045355-85046285 processed_transcript
ENSMUST00000130729 (Ssrp1-002) 85037455-85045772 protein_coding
ENSMUST00000135414 (Ssrp1-004) 85037533-85040455 processed_transcript
ENSMUST00000142359 (Ssrp1-006) 85041174-85042309 processed_transcript
ENSMUST00000145097 (Ssrp1-007) 85045251-85046718 processed_transcript
ENSMUST00000146530 (Ssrp1-005) 85040112-85041022 processed_transcript
ENSMUST00000168266 (Ssrp1-201) 85037451-85047106 protein_coding
ENSMUSG00000027071 (P2rx3)
purinergic receptor P2X, ligand-gated ion channel, 3 		ENSMUST00000028465 (P2rx3-002) 84998583-85035487 protein_coding
ENSMUST00000111613 (P2rx3-001) 84998642-85037462 protein_coding
ENSMUST00000111616 (P2rx3-003) 84998843-85035322 protein_coding
ENSMUST00000127839 (P2rx3-005) 85032054-85033194 processed_transcript
ENSMUST00000145285 (P2rx3-004) 85024917-85033310 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002NZ_0001ENSDARG00000010477ENSDART00000021417ENSDARG00000037397ENSDART00000106155ENSDART00000137795ENSDARG00000037398ENSDART00000054417ENSDART00000123225ENSDART00000131258CIL_0002NZ_0002ENSMUSG00000027067ENSMUST00000077798ENSMUST00000123467ENSMUST00000127069ENSMUST00000130729ENSMUST00000135414ENSMUST00000142359ENSMUST00000145097ENSMUST00000146530ENSMUST00000168266ENSMUSG00000027071ENSMUST00000028465ENSMUST00000111613ENSMUST00000111616ENSMUST00000127839ENSMUST00000145285
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002NZ_0001ENSDARG00000010477ENSDART00000021417ENSDARG00000037397ENSDART00000106155ENSDART00000137795ENSDARG00000037398ENSDART00000054417ENSDART00000123225CIL_0002NZ_0002ENSMUSG00000027067ENSMUST00000077798ENSMUST00000130729ENSMUST00000145097ENSMUST00000146530ENSMUST00000168266ENSMUSG00000027071ENSMUST00000028465
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010477 ENSDART00000021417 N/A N/A N/A 0.271±0.08 N/A N/A 0.299±0.25 1.360±0.37 N/A N/A 0.054±0.00 N/A N/A N/A
ENSDARG00000037397 ENSDART00000106155 N/A N/A N/A 0.655±0.26 N/A N/A 1.298±0.96 6.024±0.35 0.870±0.00 N/A 0.580±0.00 N/A N/A N/A
ENSDART00000137795 N/A N/A N/A 1.003±1.06 N/A N/A 0.624±0.57 6.381±0.00 0.869±0.00 N/A 0.579±0.00 N/A N/A N/A
ENSDARG00000037398 ENSDART00000054417 N/A N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000123225 N/A N/A N/A 0.175±0.03 N/A N/A 0.164±0.08 0.179±0.00 0.016±0.00 N/A 0.142±0.00 N/A N/A N/A
ENSDART00000131258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027067 ENSMUST00000077798 27.148±12.25 19.930±5.77 25.442±1.95 34.794±15.99 19.846±6.11 15.971±3.78 10.273±1.38 17.684±2.67 36.612±30.12 23.389±1.52 9.518±0.92 31.346±11.84 34.391±15.75 26.310±3.77
ENSMUST00000123467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130729 13.013±0.98 N/A 10.218±2.35 22.575±2.21 N/A N/A 4.249±0.36 N/A 22.717±14.26 7.230±0.00 3.569±0.00 37.384±20.35 31.946±27.95 38.294±24.05
ENSMUST00000135414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145097 N/A N/A N/A 67.351±0.00 N/A N/A N/A N/A N/A N/A N/A 143.705±0.00 104.588±53.76 176.625±0.00
ENSMUST00000146530 N/A 20.671±2.10 N/A N/A 24.490±4.60 18.917±6.07 N/A N/A 10.897±1.75 16.259±0.70 N/A 37.015±8.03 N/A N/A
ENSMUST00000168266 N/A N/A N/A N/A 28.442±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027071 ENSMUST00000028465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 36.292±6.02
ENSMUST00000111613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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