C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000038066 kpna2 7955 - 3:25471232-25478430 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000055490 kpna2-001 25471232-25478430 protein_coding
  ENSDART00000077538 kpna2-201 25471240-25478214 protein_coding
  ENSDART00000126596 kpna2-202 25471234-25478166 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000055490ENSDART00000077538ENSDART00000126596
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000055490 0.556±0.07 N/A 7.127±0.00 N/A N/A
ENSDART00000077538 5.248±0.37 N/A 2.837±0.00 N/A N/A
ENSDART00000126596 1.935±0.79 2.814±1.54 54.245±0.00 2.366±0.00 0.187±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XS CIL_0001XS_0001 CGP 3:25383214-25478430
CIL_0000KI CIL_0000KI_0001 CGP 3:25471232-25522771

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 IEA protein import into nucleus
GO:0006810 IEA transport
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000182481 KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) protein_coding Homo_sapiens
ENSMUSG00000018362 Kpna2 karyopherin (importin) alpha 2 protein_coding Mus_musculus
ENSMUSG00000066878 Gm10184 predicted pseudogene 10184 protein_coding Mus_musculus

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