C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000KI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038066-ENSDARG00000077361 CGP 7955 3:25471232-25522771
GeneTranscriptPositionBiotype
ENSDARG00000038066 (kpna2)
karyopherin alpha 2 (RAG cohort 1, importin alpha 1) 		ENSDART00000055490 (kpna2-001) 25471232-25478430 protein_coding
ENSDART00000077538 (kpna2-201) 25471240-25478214 protein_coding
ENSDART00000126596 (kpna2-202) 25471234-25478166 protein_coding
CIL_0000KI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018362-ENSMUSG00000040481 CGP 10090 11:106988629-107132127
GeneTranscriptPositionBiotype
ENSMUSG00000018362 (Kpna2)
karyopherin (importin) alpha 2 		ENSMUST00000018506 (Kpna2-001) 106988629-106999541 protein_coding
ENSMUST00000106768 (Kpna2-005) 106996215-106999369 protein_coding
ENSMUST00000124541 (Kpna2-003) 106991918-106998487 protein_coding
ENSMUST00000140362 (Kpna2-002) 106991918-106998779 protein_coding
ENSMUST00000144834 (Kpna2-004) 106991938-106999450 protein_coding
ENSMUST00000145331 (Kpna2-007) 106988629-106999440 nonsense_mediated_decay
ENSMUST00000156495 (Kpna2-006) 106991618-106992627 retained_intron
ENSMUSG00000040481 (Bptf)
bromodomain PHD finger transcription factor 		ENSMUST00000057892 (Bptf-201) 107033081-107131922 protein_coding
ENSMUST00000106762 (Bptf-002) 107033083-107132127 protein_coding
ENSMUST00000106763 (Bptf-001) 107033083-107132127 protein_coding
ENSMUST00000133317 (Bptf-004) 107046666-107052890 protein_coding
ENSMUST00000138443 (Bptf-005) 107043041-107047275 processed_transcript
ENSMUST00000147816 (Bptf-006) 107035504-107043706 processed_transcript
ENSMUST00000149486 (Bptf-003) 107060548-107067205 protein_coding
ENSMUSG00000078607 (1810010H24Rik)
RIKEN cDNA 1810010H24 gene 		ENSMUST00000106767 (1810010H24Rik-201) 107028223-107030443 antisense
ENSMUST00000140447 (1810010H24Rik-001) 107028118-107030438 antisense
ENSMUSG00000083356 (Gm11708)
predicted gene 11708 		ENSMUST00000119530 (Gm11708-001) 107003909-107004740 processed_pseudogene
ENSMUSG00000086772 (Gm11705)
predicted gene 11705 		ENSMUST00000131925 (Gm11705-001) 107025681-107025907 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KI_0001ENSDARG00000038066ENSDART00000055490ENSDART00000077538ENSDART00000126596CIL_0000KI_0002ENSMUSG00000018362ENSMUST00000018506ENSMUST00000106768ENSMUST00000124541ENSMUST00000140362ENSMUST00000144834ENSMUST00000145331ENSMUST00000156495ENSMUSG00000040481ENSMUST00000057892ENSMUST00000106762ENSMUST00000106763ENSMUST00000133317ENSMUST00000138443ENSMUST00000147816ENSMUST00000149486ENSMUSG00000078607ENSMUST00000106767ENSMUST00000140447ENSMUSG00000083356ENSMUST00000119530ENSMUSG00000086772ENSMUST00000131925
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KI_0001ENSDARG00000038066ENSDART00000055490ENSDART00000077538ENSDART00000126596CIL_0000KI_0002ENSMUSG00000018362ENSMUST00000018506ENSMUST00000106768ENSMUST00000140362ENSMUST00000145331ENSMUSG00000040481ENSMUST00000057892ENSMUST00000106763ENSMUSG00000078607ENSMUST00000106767ENSMUST00000140447ENSMUSG00000083356ENSMUST00000119530ENSMUSG00000086772ENSMUST00000131925
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038066 ENSDART00000055490 N/A N/A N/A 0.556±0.07 N/A N/A N/A 7.127±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000077538 N/A N/A N/A 5.248±0.37 N/A N/A N/A 2.837±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000126596 N/A N/A N/A 1.935±0.79 N/A N/A 2.814±1.54 54.245±0.00 2.366±0.00 N/A 0.187±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018362 ENSMUST00000018506 12.232±7.06 11.769±5.81 12.861±1.09 36.501±28.70 8.503±6.13 38.192±16.25 17.367±1.49 6.781±4.04 43.431±48.56 12.643±5.73 4.359±0.91 11.824±7.87 32.388±21.81 69.246±33.04
ENSMUST00000106768 N/A N/A N/A 1.808±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 13.535±10.31 11.155±0.00
ENSMUST00000124541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140362 N/A N/A N/A 7.103±0.00 N/A N/A N/A N/A N/A N/A N/A 34.448±0.00 30.326±23.35 46.812±0.00
ENSMUST00000144834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145331 N/A N/A N/A N/A 4.710±1.21 N/A N/A N/A 4.018±0.10 N/A N/A 6.252±3.14 N/A 6.560±0.00
ENSMUST00000156495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040481 ENSMUST00000057892 4.704±1.82 5.668±1.78 4.880±1.60 5.203±1.93 4.018±1.47 4.457±2.10 1.157±0.34 3.370±1.25 1.512±0.71 5.411±1.96 0.916±0.25 5.945±2.41 3.542±1.11 3.100±1.20
ENSMUST00000106762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106763 1.344±0.64 N/A N/A 2.506±1.13 N/A N/A 0.458±0.00 N/A N/A 1.441±0.00 0.856±0.26 1.104±0.35 1.291±0.00 N/A
ENSMUST00000133317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078607 ENSMUST00000106767 0.721±0.00 N/A 0.337±0.00 N/A 0.681±0.00 N/A 0.287±0.00 N/A 1.941±1.19 7.646±0.00 0.470±0.08 1.316±0.05 0.522±0.06 0.101±0.00
ENSMUST00000140447 1.977±0.94 1.373±0.35 1.965±0.00 1.249±0.69 3.243±0.78 1.164±0.35 1.157±0.55 1.024±0.34 2.973±3.33 17.947±1.74 0.750±0.06 2.045±0.83 0.821±0.52 0.511±0.01
ENSMUSG00000083356 ENSMUST00000119530 N/A 0.262±0.09 N/A 0.020±0.00 N/A 0.143±0.00 N/A N/A 0.021±0.01 0.148±0.00 N/A 0.196±0.11 0.019±0.01 0.107±0.05
ENSMUSG00000086772 ENSMUST00000131925 N/A N/A N/A N/A 1391.410±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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