C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001XS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038067-ENSDARG00000038066 CGP 7955 3:25383214-25478430
GeneTranscriptPositionBiotype
ENSDARG00000038066 (kpna2)
karyopherin alpha 2 (RAG cohort 1, importin alpha 1) 		ENSDART00000055490 (kpna2-001) 25471232-25478430 protein_coding
ENSDART00000077538 (kpna2-201) 25471240-25478214 protein_coding
ENSDART00000126596 (kpna2-202) 25471234-25478166 protein_coding
ENSDARG00000038067 (smurf2)
SMAD specific E3 ubiquitin protein ligase 2 		ENSDART00000055491 (smurf2-001) 25383214-25470824 protein_coding
CIL_0001XS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018363-ENSMUSG00000018362 CGP 10090 11:106820066-106999541
GeneTranscriptPositionBiotype
ENSMUSG00000018362 (Kpna2)
karyopherin (importin) alpha 2 		ENSMUST00000018506 (Kpna2-001) 106988629-106999541 protein_coding
ENSMUST00000106768 (Kpna2-005) 106996215-106999369 protein_coding
ENSMUST00000124541 (Kpna2-003) 106991918-106998487 protein_coding
ENSMUST00000140362 (Kpna2-002) 106991918-106998779 protein_coding
ENSMUST00000144834 (Kpna2-004) 106991938-106999450 protein_coding
ENSMUST00000145331 (Kpna2-007) 106988629-106999440 nonsense_mediated_decay
ENSMUST00000156495 (Kpna2-006) 106991618-106992627 retained_intron
ENSMUSG00000018363 (Smurf2)
SMAD specific E3 ubiquitin protein ligase 2 		ENSMUST00000092517 (Smurf2-002) 106822025-106920470 protein_coding
ENSMUST00000103067 (Smurf2-001) 106820066-106920715 protein_coding
ENSMUST00000130688 (Smurf2-005) 106824718-106829006 processed_transcript
ENSMUST00000139297 (Smurf2-003) 106822025-106920275 processed_transcript
ENSMUST00000144027 (Smurf2-004) 106830588-106839298 processed_transcript
ENSMUST00000167787 (Smurf2-201) 106822613-106920359 protein_coding
ENSMUSG00000086481 (Gm11707)
predicted gene 11707 		ENSMUST00000150366 (Gm11707-001) 106972058-106973090 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XS_0001ENSDARG00000038066ENSDART00000055490ENSDART00000077538ENSDART00000126596ENSDARG00000038067ENSDART00000055491CIL_0001XS_0002ENSMUSG00000018362ENSMUST00000018506ENSMUST00000106768ENSMUST00000124541ENSMUST00000140362ENSMUST00000144834ENSMUST00000145331ENSMUST00000156495ENSMUSG00000018363ENSMUST00000092517ENSMUST00000103067ENSMUST00000130688ENSMUST00000139297ENSMUST00000144027ENSMUST00000167787ENSMUSG00000086481ENSMUST00000150366
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XS_0001ENSDARG00000038066ENSDART00000055490ENSDART00000077538ENSDART00000126596ENSDARG00000038067ENSDART00000055491CIL_0001XS_0002ENSMUSG00000018362ENSMUST00000018506ENSMUST00000106768ENSMUST00000140362ENSMUST00000145331ENSMUSG00000018363ENSMUST00000092517ENSMUST00000103067ENSMUST00000139297ENSMUST00000167787ENSMUSG00000086481ENSMUST00000150366
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038066 ENSDART00000055490 N/A N/A N/A 0.556±0.07 N/A N/A N/A 7.127±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000077538 N/A N/A N/A 5.248±0.37 N/A N/A N/A 2.837±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000126596 N/A N/A N/A 1.935±0.79 N/A N/A 2.814±1.54 54.245±0.00 2.366±0.00 N/A 0.187±0.00 N/A N/A N/A
ENSDARG00000038067 ENSDART00000055491 N/A N/A N/A 6.810±5.12 N/A N/A 2.079±1.17 1.387±0.00 0.765±0.00 N/A 0.719±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018362 ENSMUST00000018506 12.232±7.06 11.769±5.81 12.861±1.09 36.501±28.70 8.503±6.13 38.192±16.25 17.367±1.49 6.781±4.04 43.431±48.56 12.643±5.73 4.359±0.91 11.824±7.87 32.388±21.81 69.246±33.04
ENSMUST00000106768 N/A N/A N/A 1.808±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 13.535±10.31 11.155±0.00
ENSMUST00000124541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140362 N/A N/A N/A 7.103±0.00 N/A N/A N/A N/A N/A N/A N/A 34.448±0.00 30.326±23.35 46.812±0.00
ENSMUST00000144834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145331 N/A N/A N/A N/A 4.710±1.21 N/A N/A N/A 4.018±0.10 N/A N/A 6.252±3.14 N/A 6.560±0.00
ENSMUST00000156495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000018363 ENSMUST00000092517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.460±0.00 N/A
ENSMUST00000103067 6.740±1.39 2.532±1.88 4.968±2.40 6.548±3.83 2.013±0.86 N/A 2.855±1.50 2.970±0.00 3.319±1.07 15.325±0.00 2.936±1.16 4.619±1.62 4.636±1.84 3.417±2.41
ENSMUST00000130688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.167±0.00 N/A N/A
ENSMUST00000144027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167787 N/A N/A N/A 6.596±0.00 2.270±0.00 N/A N/A N/A N/A N/A N/A 7.370±4.54 12.875±0.54 13.593±0.00
ENSMUSG00000086481 ENSMUST00000150366 0.174±0.11 2.113±0.87 0.052±0.03 N/A 2.040±0.97 0.259±0.14 0.306±0.02 2.889±1.02 1.466±0.73 1.207±0.31 0.490±0.00 0.312±0.00 0.076±0.01 0.087±0.00

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