C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor 7 (T-cell specific, HMG-box)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000038672 tcf7 7955 + 21:43960986-44022195 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000056474 tcf7-005 44001407-44020048 protein_coding
  ENSDART00000099497 tcf7-001 44001407-44022195 protein_coding
  ENSDART00000149156 tcf7-003 44001407-44022114 protein_coding
  ENSDART00000149272 tcf7-004 44001407-44022027 protein_coding
  ENSDART00000149314 tcf7-002 44001407-44021979 protein_coding
  ENSDART00000155681 tcf7-201 43960986-44020049 protein_coding
  ENSDART00000157136 tcf7-202 43960986-44022145 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyMuscleENSDART00000056474ENSDART00000149156ENSDART00000155681ENSDART00000157136
Transcript ID Heart Kidney Muscle
ENSDART00000056474 N/A N/A 0.390±0.00
ENSDART00000149156 0.129±0.00 N/A N/A
ENSDART00000155681 0.181±0.00 N/A N/A
ENSDART00000157136 0.110±0.00 0.338±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GN CIL_0000GN_0001 CGP 21:43960986-44034625

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 IBA chromatin binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005667 IBA transcription factor complex
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0007420 IBA brain development
GO:0008013 IBA beta-catenin binding
GO:0016055 IEA Wnt receptor signaling pathway
GO:0021513 IMP spinal cord dorsal/ventral patterning
GO:0033333 IMP fin development
GO:0033339 IMP pectoral fin development
GO:0043565 IBA sequence-specific DNA binding
GO:0044212 IBA transcription regulatory region DNA binding
GO:0048699 IBA generation of neurons
GO:0060070 IBA canonical Wnt receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000081059 TCF7 transcription factor 7 (T-cell specific, HMG-box) protein_coding Homo_sapiens
ENSMUSG00000000782 Tcf7 transcription factor 7, T cell specific protein_coding Mus_musculus

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