C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000GN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038672-ENSDARG00000003151 CGP 7955 21:43960986-44034625
GeneTranscriptPositionBiotype
ENSDARG00000003151 (skp1)
S-phase kinase-associated protein 1 		ENSDART00000008454 (skp1-001) 44026863-44034625 protein_coding
ENSDARG00000038672 (tcf7)
transcription factor 7 (T-cell specific, HMG-box) 		ENSDART00000056474 (tcf7-005) 44001407-44020048 protein_coding
ENSDART00000099497 (tcf7-001) 44001407-44022195 protein_coding
ENSDART00000149156 (tcf7-003) 44001407-44022114 protein_coding
ENSDART00000149272 (tcf7-004) 44001407-44022027 protein_coding
ENSDART00000149314 (tcf7-002) 44001407-44021979 protein_coding
ENSDART00000155681 (tcf7-201) 43960986-44020049 protein_coding
ENSDART00000157136 (tcf7-202) 43960986-44022145 protein_coding
CIL_0000GN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000081059-ENSG00000113558 CGP 9606 5:134114711-134177038
GeneTranscriptPositionBiotype
ENSG00000113558 (SKP1)
S-phase kinase-associated protein 1 		ENST00000328392 (SKP1-008) 134157941-134176950 protein_coding
ENST00000353411 (SKP1-001) 134148935-134177038 protein_coding
ENST00000517625 (SKP1-004) 134157508-134176719 protein_coding
ENST00000517691 (SKP1-013) 134157474-134161897 retained_intron
ENST00000519054 (SKP1-011) 134158480-134176958 nonsense_mediated_decay
ENST00000519321 (SKP1-003) 134158484-134176950 protein_coding
ENST00000520417 (SKP1-006) 134160996-134174765 protein_coding
ENST00000521216 (SKP1-009) 134157392-134176920 protein_coding
ENST00000522552 (SKP1-002) 134157338-134176964 protein_coding
ENST00000522855 (SKP1-005) 134157572-134176950 protein_coding
ENST00000523359 (SKP1-007) 134173967-134175570 protein_coding
ENST00000523966 (SKP1-010) 134157510-134176950 nonsense_mediated_decay
ENST00000524288 (SKP1-012) 134173387-134176950 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GN_0001ENSDARG00000003151ENSDART00000008454ENSDARG00000038672ENSDART00000056474ENSDART00000099497ENSDART00000149156ENSDART00000149272ENSDART00000149314ENSDART00000155681ENSDART00000157136CIL_0000GN_0002ENSG00000113558ENST00000328392ENST00000353411ENST00000517625ENST00000517691ENST00000519054ENST00000519321ENST00000520417ENST00000521216ENST00000522552ENST00000522855ENST00000523359ENST00000523966ENST00000524288
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000GN_0001ENSDARG00000003151ENSDART00000008454ENSDARG00000038672ENSDART00000056474ENSDART00000149156ENSDART00000155681ENSDART00000157136CIL_0000GN_0002ENSG00000113558ENST00000328392ENST00000353411ENST00000517625ENST00000521216ENST00000522855
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003151 ENSDART00000008454 N/A N/A N/A 164.887±109.82 N/A N/A 207.186±32.60 65.758±65.49 12.834±0.00 N/A 102.808±0.00 N/A N/A N/A
ENSDARG00000038672 ENSDART00000056474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.390±0.00 N/A N/A N/A
ENSDART00000099497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149156 N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000149314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000155681 N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000157136 N/A N/A N/A N/A N/A N/A 0.110±0.00 0.338±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113558 ENST00000328392 N/A N/A 32.639±0.00 93.498±0.00 N/A 32.748±0.00 27.302±0.00 41.321±0.00 44.474±0.00 86.777±0.00 49.740±13.91 92.803±37.43 165.278±56.71 246.000±0.00
ENST00000353411 4.009±0.00 5.964±0.00 1.887±0.00 9.523±3.93 3.873±1.47 3.258±1.25 1.126±0.00 3.732±2.24 2.411±0.52 4.316±0.61 2.190±0.96 3.859±0.68 N/A 7.127±0.00
ENST00000517625 N/A N/A N/A 42.638±0.00 N/A N/A 73.215±0.00 74.201±0.00 26.391±2.95 56.384±0.00 29.809±14.29 72.379±1.98 53.651±0.00 N/A
ENST00000517691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521216 75.449±0.00 79.920±0.00 N/A 240.959±0.00 109.229±0.00 64.287±48.24 57.506±49.49 52.289±39.31 38.167±0.00 83.984±0.00 40.293±26.13 82.849±27.59 104.274±21.18 123.597±38.20
ENST00000522552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522855 N/A N/A N/A N/A N/A 60.126±0.00 N/A N/A N/A N/A N/A N/A N/A 76.564±0.00
ENST00000523359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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