C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: intraflagellar transport 80 homolog (Chlamydomonas)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000038879 ift80 7955 - 15:1489699-1529464 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000056763 ift80-201 1489703-1529438 protein_coding
  ENSDART00000133943 ift80-001 1489699-1529464 protein_coding
  ENSDART00000142319 ift80-002 1518678-1529425 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000056763ENSDART00000133943
Transcript ID Brain Heart Kidney Muscle
ENSDART00000056763 7.571±0.36 3.215±0.38 1.944±0.00 1.273±0.00
ENSDART00000133943 N/A N/A 0.738±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JR CIL_0004JR_0001 CGP 15:1489699-1568335

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005929 IEA cilium
GO:0008104 IMP protein localization
GO:0042995 IEA cell projection
GO:0060026 IMP convergent extension
GO:0060042 IMP retina morphogenesis in camera-type eye
GO:0060271 IMP cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000068885 IFT80 intraflagellar transport 80 protein_coding Homo_sapiens
ENSMUSG00000027778 Ift80 intraflagellar transport 80 protein_coding Mus_musculus

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