C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000039213 prpf38a 7955 - 6:33624474-33629341 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000057290 prpf38a-001 33624474-33629341 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000057290
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000057290 12.329±3.30 7.150±3.11 20.011±3.13 1.544±0.00 3.298±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001CE CIL_0001CE_0001 CGP 6:33624474-33645524

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000134748 PRPF38A pre-mRNA processing factor 38A protein_coding Homo_sapiens
ENSMUSG00000063800 Prpf38a PRP38 pre-mRNA processing factor 38 (yeast) domain containing A protein_coding Mus_musculus

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