C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: splicing factor 3a, subunit 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000041887 sf3a1 7955 + 8:37666959-37691671 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000061378 sf3a1-201 37672162-37682372 protein_coding
  ENSDART00000121416 sf3a1-202 37672354-37691671 protein_coding
  ENSDART00000126687 sf3a1-001 37666959-37682379 protein_coding
  ENSDART00000136418 sf3a1-003 37672162-37674501 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000061378ENSDART00000121416ENSDART00000126687
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000061378 10.004±4.39 31.128±21.98 62.287±37.78 5.008±0.00 11.510±0.00
ENSDART00000121416 1.178±0.00 N/A N/A N/A N/A
ENSDART00000126687 11.529±2.74 9.838±0.34 7.150±0.00 N/A 1.750±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VN CIL_0003VN_0001 CGP 8:37655657-37691671

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0006396 IEA RNA processing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000099995 SF3A1 splicing factor 3a, subunit 1, 120kDa protein_coding Homo_sapiens
ENSMUSG00000002129 Sf3a1 splicing factor 3a, subunit 1 protein_coding Mus_musculus

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