C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003VN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056279-ENSDARG00000041887 CGP 7955 8:37655657-37691671
GeneTranscriptPositionBiotype
ENSDARG00000041887 (sf3a1)
splicing factor 3a, subunit 1 		ENSDART00000061378 (sf3a1-201) 37672162-37682372 protein_coding
ENSDART00000121416 (sf3a1-202) 37672354-37691671 protein_coding
ENSDART00000126687 (sf3a1-001) 37666959-37682379 protein_coding
ENSDART00000136418 (sf3a1-003) 37672162-37674501 protein_coding
ENSDARG00000056279 (ccdc157)
coiled-coil domain containing 157 		ENSDART00000078746 (ccdc157-201) 37655657-37666708 protein_coding
ENSDART00000132804 (ccdc157-001) 37655657-37666818 protein_coding
CIL_0003VN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051427-ENSMUSG00000002129 CGP 10090 11:4141123-4182541
GeneTranscriptPositionBiotype
ENSMUSG00000002129 (Sf3a1)
splicing factor 3a, subunit 1 		ENSMUST00000002198 (Sf3a1-003) 4160350-4182541 protein_coding
ENSMUST00000129583 (Sf3a1-002) 4160355-4173110 processed_transcript
ENSMUST00000132666 (Sf3a1-004) 4160355-4171913 retained_intron
ENSMUST00000133095 (Sf3a1-001) 4177548-4179419 retained_intron
ENSMUSG00000003581 (Rnf215)
ring finger protein 215 		ENSMUST00000003677 (Rnf215-001) 4135202-4141172 protein_coding
ENSMUST00000124670 (Rnf215-002) 4135282-4137217 protein_coding
ENSMUST00000127165 (Rnf215-004) 4135502-4137155 processed_transcript
ENSMUST00000145705 (Rnf215-003) 4135214-4137368 protein_coding
ENSMUSG00000051427 (Ccdc157)
coiled-coil domain containing 157 		ENSMUST00000093381 (Ccdc157-001) 4141123-4160291 protein_coding
ENSMUST00000101626 (Ccdc157-201) 4141123-4160293 protein_coding
ENSMUST00000132712 (Ccdc157-004) 4151491-4160252 processed_transcript
ENSMUST00000133962 (Ccdc157-005) 4150008-4160218 processed_transcript
ENSMUST00000137060 (Ccdc157-002) 4141123-4147665 processed_transcript
ENSMUST00000139099 (Ccdc157-003) 4148814-4160218 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003VN_0001ENSDARG00000041887ENSDART00000061378ENSDART00000121416ENSDART00000126687ENSDART00000136418ENSDARG00000056279ENSDART00000078746ENSDART00000132804CIL_0003VN_0002ENSMUSG00000002129ENSMUST00000002198ENSMUST00000129583ENSMUST00000132666ENSMUST00000133095ENSMUSG00000003581ENSMUST00000003677ENSMUST00000124670ENSMUST00000127165ENSMUST00000145705ENSMUSG00000051427ENSMUST00000093381ENSMUST00000101626ENSMUST00000132712ENSMUST00000133962ENSMUST00000137060ENSMUST00000139099
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003VN_0001ENSDARG00000041887ENSDART00000061378ENSDART00000121416ENSDART00000126687ENSDARG00000056279ENSDART00000078746ENSDART00000132804CIL_0003VN_0002ENSMUSG00000002129ENSMUST00000002198ENSMUSG00000003581ENSMUST00000003677ENSMUST00000145705ENSMUSG00000051427ENSMUST00000093381ENSMUST00000101626ENSMUST00000137060
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041887 ENSDART00000061378 N/A N/A N/A 10.004±4.39 N/A N/A 31.128±21.98 62.287±37.78 5.008±0.00 N/A 11.510±0.00 N/A N/A N/A
ENSDART00000121416 N/A N/A N/A 1.178±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000126687 N/A N/A N/A 11.529±2.74 N/A N/A 9.838±0.34 7.150±0.00 N/A N/A 1.750±0.00 N/A N/A N/A
ENSDART00000136418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000056279 ENSDART00000078746 N/A N/A N/A 0.276±0.06 N/A N/A 0.074±0.01 0.798±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000132804 N/A N/A N/A 0.130±0.01 N/A N/A 0.132±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002129 ENSMUST00000002198 8.878±4.60 23.515±1.56 10.594±2.16 17.106±8.19 12.534±8.75 13.622±6.63 6.325±0.62 9.378±1.35 6.953±3.62 14.804±2.60 3.093±0.32 24.274±8.08 11.510±5.97 8.395±3.65
ENSMUST00000129583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000003581 ENSMUST00000003677 17.283±1.57 22.691±1.06 15.039±0.35 21.024±7.89 11.998±2.68 11.547±1.07 6.169±0.90 12.251±0.85 5.503±0.86 30.545±1.91 2.385±0.48 21.515±3.62 17.146±9.39 N/A
ENSMUST00000124670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145705 N/A N/A N/A N/A 12.839±0.27 N/A N/A N/A N/A 24.190±0.00 N/A N/A N/A N/A
ENSMUSG00000051427 ENSMUST00000093381 5.083±0.88 6.249±1.60 4.958±0.66 5.142±0.61 4.174±0.58 3.597±0.34 1.951±0.57 4.049±0.41 2.568±1.30 9.576±1.17 0.880±0.32 9.891±3.48 2.073±1.20 17.767±6.07
ENSMUST00000101626 N/A N/A N/A N/A 0.995±0.00 N/A 0.491±0.00 N/A N/A N/A 0.444±0.00 N/A N/A N/A
ENSMUST00000132712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137060 2.488±0.00 N/A 2.270±0.62 2.572±0.00 N/A N/A 1.030±0.04 1.638±0.17 0.382±0.00 N/A 0.678±0.22 N/A 1.436±0.34 N/A
ENSMUST00000139099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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