C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin, alpha 6a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000042282 itga6a 7955 + 9:3426112-3482938 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000082153 itga6a-002 3426193-3479640 protein_coding
  ENSDART00000114168 itga6a-001 3426112-3482938 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000082153ENSDART00000114168
Transcript ID Brain Heart Kidney Muscle
ENSDART00000082153 1.933±0.00 0.125±0.00 N/A 0.057±0.00
ENSDART00000114168 1.440±0.37 0.548±0.11 0.754±0.47 0.370±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IK CIL_0003IK_0001 CGP 9:3393859-3482938

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007155 IEA cell adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0007519 IGI skeletal muscle tissue development
GO:0008305 IEA integrin complex
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000091409 ITGA6 integrin, alpha 6 protein_coding Homo_sapiens
ENSMUSG00000027111 Itga6 integrin alpha 6 protein_coding Mus_musculus

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