C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, Ca++ transporting, plasma membrane 3a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000043474 atp2b3a 7955 - 8:14519339-14569300 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000045917 atp2b3a-201 14519339-14566689 protein_coding
  ENSDART00000090252 atp2b3a-202 14520276-14566355 protein_coding
  ENSDART00000093117 atp2b3a-002 14523663-14566355 protein_coding
  ENSDART00000133922 atp2b3a-004 14558251-14567709 protein_coding
  ENSDART00000135811 atp2b3a-001 14520183-14569300 protein_coding
  ENSDART00000140605 atp2b3a-003 14546872-14560835 retained_intron

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleENSDART00000090252ENSDART00000093117ENSDART00000135811ENSDART00000140605
Transcript ID Brain Liver Muscle
ENSDART00000090252 20.844±0.00 0.048±0.00 1.100±0.00
ENSDART00000093117 24.143±1.45 N/A 0.897±0.00
ENSDART00000135811 25.892±11.22 0.043±0.00 1.710±0.00
ENSDART00000140605 N/A 0.202±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0006812 IEA cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016787 IEA hydrolase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000067842 ATP2B3 ATPase, Ca++ transporting, plasma membrane 3 protein_coding Homo_sapiens
ENSMUSG00000031376 Atp2b3 ATPase, Ca++ transporting, plasma membrane 3 protein_coding Mus_musculus

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