C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000093117 atp2b3a-002 ENSDARG00000043474 7955 - 8:14523663-14566355 protein_coding

Danio rerio EnsemblZv9

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENSDART00000093117
Transcript ID Brain Muscle
ENSDART00000093117 24.143±1.45 0.897±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0006812 IEA cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016787 IEA hydrolase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033744 Atp2b3-003 protein_coding Mus_musculus 0 1759
ENSMUST00000088429 Atp2b3-001 protein_coding Mus_musculus 0 1762
ENSMUST00000089003 Atp2b2-004 protein_coding Mus_musculus 0 1319
ENSMUST00000101044 Atp2b2-003 protein_coding Mus_musculus 0 1319
ENSMUST00000101045 Atp2b2-001 protein_coding Mus_musculus 0 1319
ENSMUST00000114479 Atp2b3-002 protein_coding Mus_musculus 0 1895
ENSMUST00000152831 Atp2b2-002 nonsense_mediated_decay Mus_musculus 0 1319
ENST00000359149 ATP2B3-006 protein_coding Homo_sapiens 0 1881
ENST00000370186 ATP2B3-001 protein_coding Homo_sapiens 0 1458
ENST00000393842 ATP2B3-004 protein_coding Homo_sapiens 0 1467

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