C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, Ca++ transporting, plasma membrane 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031376 Atp2b3 10090 + X:73503086-73571005 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033744 Atp2b3-003 73503086-73558214 protein_coding
  ENSMUST00000088429 Atp2b3-001 73503086-73571005 protein_coding
  ENSMUST00000114479 Atp2b3-002 73503086-73571005 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033744ENSMUST00000088429ENSMUST00000114479
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033744 0.021±0.01 9.528±3.11 N/A 0.346±0.06 0.182±0.02 0.019±0.00 0.063±0.01 0.011±0.00 0.018±0.00 0.818±0.11 0.787±0.19 0.060±0.01 0.487±0.29
ENSMUST00000088429 0.030±0.00 2.734±0.00 1.315±0.17 0.105±0.02 0.188±0.11 0.062±0.00 0.046±0.00 N/A 0.027±0.00 N/A 1.024±0.07 0.018±0.00 0.223±0.05
ENSMUST00000114479 N/A 6.322±2.29 1.590±0.63 N/A 0.131±0.04 0.037±0.01 0.051±0.02 N/A N/A N/A 1.292±0.66 N/A 0.427±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V0 CIL_0001V0_0002 CGP X:73483602-73571005

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0031982 IEA vesicle
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023445 atp2b3b ATPase, Ca++ transporting, plasma membrane 3b protein_coding Danio_rerio
ENSDARG00000043474 atp2b3a ATPase, Ca++ transporting, plasma membrane 3a protein_coding Danio_rerio
ENSG00000067842 ATP2B3 ATPase, Ca++ transporting, plasma membrane 3 protein_coding Homo_sapiens

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