C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, Ca++ transporting, plasma membrane 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000044902 atp2b4 7955 - 11:23855471-24015349 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000046122 atp2b4-001 23860664-24015349 protein_coding
  ENSDART00000127791 atp2b4-201 23855471-23960266 protein_coding
  ENSDART00000129307 atp2b4-002 23927399-24015339 retained_intron

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverENSDART00000046122ENSDART00000127791
Transcript ID Heart Kidney Liver
ENSDART00000046122 2.711±1.22 6.543±0.00 0.308±0.00
ENSDART00000127791 3.209±2.30 1.605±0.84 0.221±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VX CIL_0005VX_0001 CGP 11:23855471-24153746

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0006812 IEA cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016787 IEA hydrolase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000058668 ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 protein_coding Homo_sapiens
ENSMUSG00000026463 Atp2b4 ATPase, Ca++ transporting, plasma membrane 4 protein_coding Mus_musculus

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