C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005VX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044902-ENSDARG00000014358 CGP 7955 11:23855471-24153746
GeneTranscriptPositionBiotype
ENSDARG00000014358 (optc)
opticin 		ENSDART00000003646 (optc-001) 24140268-24153746 protein_coding
ENSDARG00000044902 (atp2b4)
ATPase, Ca++ transporting, plasma membrane 4 		ENSDART00000046122 (atp2b4-001) 23860664-24015349 protein_coding
ENSDART00000127791 (atp2b4-201) 23855471-23960266 protein_coding
ENSDART00000129307 (atp2b4-002) 23927399-24015339 retained_intron
CIL_0005VX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026463-ENSMUSG00000010311 CGP 10090 1:133699457-133907999
GeneTranscriptPositionBiotype
ENSMUSG00000010311 (Optc)
opticin 		ENSMUST00000124051 (Optc-001) 133897199-133907172 protein_coding
ENSMUST00000124245 (Optc-005) 133897199-133901327 retained_intron
ENSMUST00000126123 (Optc-004) 133900834-133907002 protein_coding
ENSMUST00000149380 (Optc-003) 133897699-133907126 protein_coding
ENSMUST00000153617 (Optc-002) 133897200-133907999 protein_coding
ENSMUSG00000026463 (Atp2b4)
ATPase, Ca++ transporting, plasma membrane 4 		ENSMUST00000048953 (Atp2b4-201) 133702674-133753747 protein_coding
ENSMUST00000112264 (Atp2b4-002) 133713981-133753281 protein_coding
ENSMUST00000125659 (Atp2b4-003) 133706311-133753681 protein_coding
ENSMUST00000128692 (Atp2b4-005) 133753700-133801036 processed_transcript
ENSMUST00000140810 (Atp2b4-004) 133716323-133717929 retained_intron
ENSMUST00000143567 (Atp2b4-001) 133699457-133801041 protein_coding
ENSMUST00000165602 (Atp2b4-202) 133702674-133753747 protein_coding
ENSMUST00000167348 (Atp2b4-203) 133701639-133701881 protein_coding
ENSMUSG00000100830 (RP23-18J18.2)
predicted gene 28441 		ENSMUST00000190927 (RP23-18J18.2-001) 133835189-133838372 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VX_0001ENSDARG00000014358ENSDART00000003646ENSDARG00000044902ENSDART00000046122ENSDART00000127791ENSDART00000129307CIL_0005VX_0002ENSMUSG00000010311ENSMUST00000124051ENSMUST00000124245ENSMUST00000126123ENSMUST00000149380ENSMUST00000153617ENSMUSG00000026463ENSMUST00000048953ENSMUST00000112264ENSMUST00000125659ENSMUST00000128692ENSMUST00000140810ENSMUST00000143567ENSMUST00000165602ENSMUST00000167348ENSMUSG00000100830ENSMUST00000190927
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VX_0001ENSDARG00000014358ENSDART00000003646ENSDARG00000044902ENSDART00000046122ENSDART00000127791CIL_0005VX_0002ENSMUSG00000010311ENSMUST00000124051ENSMUST00000124245ENSMUST00000126123ENSMUST00000149380ENSMUST00000153617ENSMUSG00000026463ENSMUST00000048953ENSMUST00000125659ENSMUST00000143567ENSMUST00000165602ENSMUSG00000100830ENSMUST00000190927
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014358 ENSDART00000003646 N/A N/A N/A 0.083±0.03 N/A N/A 0.622±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000044902 ENSDART00000046122 N/A N/A N/A N/A N/A N/A 2.711±1.22 6.543±0.00 0.308±0.00 N/A N/A N/A N/A N/A
ENSDART00000127791 N/A N/A N/A N/A N/A N/A 3.209±2.30 1.605±0.84 0.221±0.00 N/A N/A N/A N/A N/A
ENSDART00000129307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000010311 ENSMUST00000124051 1.112±0.10 0.147±0.05 N/A 0.790±0.26 0.159±0.07 N/A 0.072±0.04 0.132±0.00 0.029±0.00 0.188±0.03 N/A 0.703±0.19 N/A 0.338±0.12
ENSMUST00000124245 1.999±0.61 N/A 16.983±0.00 0.061±0.00 0.066±0.01 2.032±0.44 0.076±0.00 N/A 0.011±0.01 N/A 0.019±0.00 0.761±0.17 N/A 0.128±0.10
ENSMUST00000126123 N/A 0.297±0.08 N/A 1.149±1.05 0.318±0.17 N/A N/A 0.090±0.00 0.074±0.03 N/A N/A N/A 0.094±0.00 N/A
ENSMUST00000149380 N/A 0.130±0.02 N/A N/A 0.163±0.05 N/A N/A N/A 0.026±0.01 N/A N/A N/A 0.075±0.00 N/A
ENSMUST00000153617 N/A N/A 48.810±0.00 0.448±0.13 N/A 4.658±2.47 N/A N/A 0.048±0.03 N/A 0.070±0.01 N/A 0.205±0.08 0.026±0.00
ENSMUSG00000026463 ENSMUST00000048953 N/A N/A 59.720±10.68 4.251±4.17 N/A 3.190±0.76 0.465±0.00 N/A N/A N/A 0.452±0.02 3.093±0.38 3.247±0.00 1.888±0.11
ENSMUST00000112264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125659 10.422±0.00 1.724±0.71 N/A 21.578±0.00 2.045±0.34 7.142±0.97 1.080±0.16 1.253±0.00 0.159±0.00 2.300±0.21 N/A 4.824±1.20 0.819±0.51 5.520±0.72
ENSMUST00000128692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143567 2.924±0.14 0.757±0.23 9.927±1.33 N/A 1.034±0.21 2.253±0.15 0.511±0.04 0.419±0.09 0.925±0.94 0.976±0.32 0.166±0.03 2.081±0.56 N/A N/A
ENSMUST00000165602 18.978±1.29 2.595±0.14 N/A 4.385±0.00 5.227±0.96 5.395±1.23 2.303±0.25 2.450±0.31 7.168±8.32 4.242±0.48 1.557±0.18 6.471±2.41 3.169±1.62 7.959±2.73
ENSMUST00000167348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100830 ENSMUST00000190927 0.028±0.00 N/A 0.006±0.00 0.018±0.00 0.032±0.00 N/A N/A 0.025±0.00 0.022±0.01 0.047±0.02 N/A 0.063±0.00 0.029±0.00 0.497±0.40

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