C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005VX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044902-ENSDARG00000014358 CGP 7955 11:23855471-24153746
GeneTranscriptPositionBiotype
ENSDARG00000014358 (optc)
opticin 		ENSDART00000003646 (optc-001) 24140268-24153746 protein_coding
ENSDARG00000044902 (atp2b4)
ATPase, Ca++ transporting, plasma membrane 4 		ENSDART00000046122 (atp2b4-001) 23860664-24015349 protein_coding
ENSDART00000127791 (atp2b4-201) 23855471-23960266 protein_coding
ENSDART00000129307 (atp2b4-002) 23927399-24015339 retained_intron

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0005VX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026463-ENSMUSG00000010311 CGP 10090 1:133699457-133907999
GeneTranscriptPositionBiotype
ENSMUSG00000010311 (Optc)
opticin 		ENSMUST00000124051 (Optc-001) 133897199-133907172 protein_coding
ENSMUST00000124245 (Optc-005) 133897199-133901327 retained_intron
ENSMUST00000126123 (Optc-004) 133900834-133907002 protein_coding
ENSMUST00000149380 (Optc-003) 133897699-133907126 protein_coding
ENSMUST00000153617 (Optc-002) 133897200-133907999 protein_coding
ENSMUSG00000026463 (Atp2b4)
ATPase, Ca++ transporting, plasma membrane 4 		ENSMUST00000048953 (Atp2b4-201) 133702674-133753747 protein_coding
ENSMUST00000112264 (Atp2b4-002) 133713981-133753281 protein_coding
ENSMUST00000125659 (Atp2b4-003) 133706311-133753681 protein_coding
ENSMUST00000128692 (Atp2b4-005) 133753700-133801036 processed_transcript
ENSMUST00000140810 (Atp2b4-004) 133716323-133717929 retained_intron
ENSMUST00000143567 (Atp2b4-001) 133699457-133801041 protein_coding
ENSMUST00000165602 (Atp2b4-202) 133702674-133753747 protein_coding
ENSMUST00000167348 (Atp2b4-203) 133701639-133701881 protein_coding
ENSMUSG00000100830 (RP23-18J18.2)
predicted gene 28441 		ENSMUST00000190927 (RP23-18J18.2-001) 133835189-133838372 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VX_0001ENSDARG00000014358ENSDART00000003646ENSDARG00000044902ENSDART00000046122ENSDART00000127791ENSDART00000129307CIL_0005VX_0002ENSMUSG00000010311ENSMUST00000124051ENSMUST00000124245ENSMUST00000126123ENSMUST00000149380ENSMUST00000153617ENSMUSG00000026463ENSMUST00000048953ENSMUST00000112264ENSMUST00000125659ENSMUST00000128692ENSMUST00000140810ENSMUST00000143567ENSMUST00000165602ENSMUST00000167348ENSMUSG00000100830ENSMUST00000190927
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005VX_0001ENSDARG00000014358ENSDART00000003646ENSDARG00000044902ENSDART00000046122ENSDART00000127791CIL_0005VX_0002ENSMUSG00000010311ENSMUST00000124051ENSMUST00000124245ENSMUST00000126123ENSMUST00000149380ENSMUST00000153617ENSMUSG00000026463ENSMUST00000048953ENSMUST00000125659ENSMUST00000143567ENSMUST00000165602ENSMUSG00000100830ENSMUST00000190927
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014358 ENSDART00000003646 N/A N/A N/A 0.083±0.03 N/A N/A 0.622±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000044902 ENSDART00000046122 N/A N/A N/A N/A N/A N/A 2.711±1.22 6.543±0.00 0.308±0.00 N/A N/A N/A N/A N/A
ENSDART00000127791 N/A N/A N/A N/A N/A N/A 3.209±2.30 1.605±0.84 0.221±0.00 N/A N/A N/A N/A N/A
ENSDART00000129307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000010311 ENSMUST00000124051 1.112±0.10 0.147±0.05 N/A 0.790±0.26 0.159±0.07 N/A 0.072±0.04 0.132±0.00 0.029±0.00 0.188±0.03 N/A 0.703±0.19 N/A 0.338±0.12
ENSMUST00000124245 1.999±0.61 N/A 16.983±0.00 0.061±0.00 0.066±0.01 2.032±0.44 0.076±0.00 N/A 0.011±0.01 N/A 0.019±0.00 0.761±0.17 N/A 0.128±0.10
ENSMUST00000126123 N/A 0.297±0.08 N/A 1.149±1.05 0.318±0.17 N/A N/A 0.090±0.00 0.074±0.03 N/A N/A N/A 0.094±0.00 N/A
ENSMUST00000149380 N/A 0.130±0.02 N/A N/A 0.163±0.05 N/A N/A N/A 0.026±0.01 N/A N/A N/A 0.075±0.00 N/A
ENSMUST00000153617 N/A N/A 48.810±0.00 0.448±0.13 N/A 4.658±2.47 N/A N/A 0.048±0.03 N/A 0.070±0.01 N/A 0.205±0.08 0.026±0.00
ENSMUSG00000026463 ENSMUST00000048953 N/A N/A 59.720±10.68 4.251±4.17 N/A 3.190±0.76 0.465±0.00 N/A N/A N/A 0.452±0.02 3.093±0.38 3.247±0.00 1.888±0.11
ENSMUST00000112264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125659 10.422±0.00 1.724±0.71 N/A 21.578±0.00 2.045±0.34 7.142±0.97 1.080±0.16 1.253±0.00 0.159±0.00 2.300±0.21 N/A 4.824±1.20 0.819±0.51 5.520±0.72
ENSMUST00000128692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143567 2.924±0.14 0.757±0.23 9.927±1.33 N/A 1.034±0.21 2.253±0.15 0.511±0.04 0.419±0.09 0.925±0.94 0.976±0.32 0.166±0.03 2.081±0.56 N/A N/A
ENSMUST00000165602 18.978±1.29 2.595±0.14 N/A 4.385±0.00 5.227±0.96 5.395±1.23 2.303±0.25 2.450±0.31 7.168±8.32 4.242±0.48 1.557±0.18 6.471±2.41 3.169±1.62 7.959±2.73
ENSMUST00000167348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100830 ENSMUST00000190927 0.028±0.00 N/A 0.006±0.00 0.018±0.00 0.032±0.00 N/A N/A 0.025±0.00 0.022±0.01 0.047±0.02 N/A 0.063±0.00 0.029±0.00 0.497±0.40

Loading