C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 8, E3 ubiquitin protein ligase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000044949 rnf8 7955 - 20:51700895-51723773 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000066072 rnf8-001 51700895-51723773 protein_coding
  ENSDART00000151429 rnf8-002 51700897-51723720 protein_coding
  ENSDART00000151789 rnf8-003 51707401-51714663 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000066072ENSDART00000151429ENSDART00000151789
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000066072 2.564±2.12 1.947±0.00 6.246±0.00 0.494±0.00 5.074±0.00
ENSDART00000151429 3.544±0.52 4.363±1.39 1.419±0.00 0.841±0.00 N/A
ENSDART00000151789 0.174±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0046872 IEA metal ion binding
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000112130 RNF8 ring finger protein 8, E3 ubiquitin protein ligase protein_coding Homo_sapiens
ENSMUSG00000090083 Rnf8 ring finger protein 8 protein_coding Mus_musculus
ENSMUSG00000098374 Gm28043 predicted gene, 28043 protein_coding Mus_musculus

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