C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene, 28043
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000098374 Gm28043 10090 + 17:29614876-29703359 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000130871 Gm28043-001 29614876-29703359 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMuscleOvaryPlacentaENSMUST00000130871
Transcript ID Bladder Brain Liver Muscle Ovary Placenta
ENSMUST00000130871 6.924±0.92 6.542±0.33 5.497±0.87 2.951±0.47 7.468±0.97 6.991±1.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089L CIL_00089L_0002 VISTA 17:29133661-29735358
CIL_0005CZ CIL_0005CZ_0002 CGP 17:29549788-29641664
CIL_0001Z5 CIL_0001Z5_0002 CGP 17:29614876-29705979

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044949 rnf8 ring finger protein 8, E3 ubiquitin protein ligase protein_coding Danio_rerio
ENSG00000112130 RNF8 ring finger protein 8, E3 ubiquitin protein ligase protein_coding Homo_sapiens

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