C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000045513 taf3 7955 - 4:24171361-24255591 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000066929 taf3-001 24171361-24255591 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000066929
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000066929 10.965±6.15 5.943±3.04 5.915±4.50 0.763±0.00 5.161±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J5 CIL_0007J5_0003 UCNEbase 4:23895941-24194175
CIL_0000WL CIL_0000WL_0001 CGP 4:24171361-24268685

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005669 ISS transcription factor TFIID complex
GO:0008134 IPI transcription factor binding
GO:0008270 IEA zinc ion binding
GO:0030097 IMP hemopoiesis
GO:0044212 IPI transcription regulatory region DNA binding
GO:0046872 IEA metal ion binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165632 TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa protein_coding Homo_sapiens
ENSMUSG00000025782 Taf3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_coding Mus_musculus

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