C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000WL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045513-ENSDARG00000045514 CGP 7955 4:24171361-24268685
GeneTranscriptPositionBiotype
ENSDARG00000045513 (taf3)
TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto 		ENSDART00000066929 (taf3-001) 24171361-24255591 protein_coding
ENSDARG00000045514 (atp5c1)
ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 		ENSDART00000066930 (atp5c1-001) 24260432-24268685 protein_coding
CIL_0000WL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025782-ENSMUSG00000025781 CGP 10090 2:9914552-10080510
GeneTranscriptPositionBiotype
ENSMUSG00000025781 (Atp5c1)
ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 		ENSMUST00000026887 (Atp5c1-002) 10056016-10080427 protein_coding
ENSMUST00000114896 (Atp5c1-003) 10056030-10080444 protein_coding
ENSMUST00000114897 (Atp5c1-001) 10056030-10080510 protein_coding
ENSMUST00000130067 (Atp5c1-006) 10064159-10080055 protein_coding
ENSMUST00000139810 (Atp5c1-004) 10063481-10080176 protein_coding
ENSMUST00000145530 (Atp5c1-005) 10063286-10080322 protein_coding
ENSMUST00000153554 (Atp5c1-007) 10063337-10079859 protein_coding
ENSMUSG00000025782 (Taf3)
TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor 		ENSMUST00000026888 (Taf3-001) 9914552-10048596 protein_coding
ENSMUST00000114906 (Taf3-004) 9916076-9918834 protein_coding
ENSMUST00000114907 (Taf3-005) 9916078-9918408 protein_coding
ENSMUST00000114909 (Taf3-002) 9914554-9953657 protein_coding
ENSMUST00000129720 (Taf3-003) 9915291-9941751 processed_transcript
ENSMUSG00000075534 (Gm13262)
predicted gene 13262 		ENSMUST00000149014 (Gm13262-001) 9906178-9914678 antisense
ENSMUSG00000077733 (Gm23608)
predicted gene, 23608 		ENSMUST00000104545 (Gm23608-201) 10075653-10075780 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000WL_0001ENSDARG00000045513ENSDART00000066929ENSDARG00000045514ENSDART00000066930CIL_0000WL_0002ENSMUSG00000025781ENSMUST00000026887ENSMUST00000114896ENSMUST00000114897ENSMUST00000130067ENSMUST00000139810ENSMUST00000145530ENSMUST00000153554ENSMUSG00000025782ENSMUST00000026888ENSMUST00000114906ENSMUST00000114907ENSMUST00000114909ENSMUST00000129720ENSMUSG00000075534ENSMUST00000149014ENSMUSG00000077733ENSMUST00000104545
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000WL_0001ENSDARG00000045513ENSDART00000066929ENSDARG00000045514ENSDART00000066930CIL_0000WL_0002ENSMUSG00000025781ENSMUST00000026887ENSMUST00000114897ENSMUST00000139810ENSMUSG00000025782ENSMUST00000026888ENSMUST00000114906ENSMUST00000114907ENSMUST00000114909ENSMUST00000129720ENSMUSG00000075534ENSMUST00000149014ENSMUSG00000077733ENSMUST00000104545
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045513 ENSDART00000066929 N/A N/A N/A 10.965±6.15 N/A N/A 5.943±3.04 5.915±4.50 0.763±0.00 N/A 5.161±0.00 N/A N/A N/A
ENSDARG00000045514 ENSDART00000066930 N/A N/A N/A 94.037±91.87 N/A N/A 553.959±412.99 76.029±96.19 34.732±0.00 N/A 321.954±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025781 ENSMUST00000026887 108.063±6.02 103.266±17.83 66.973±4.48 41.798±0.00 290.645±121.68 178.185±14.61 742.361±140.46 239.767±43.02 121.904±33.71 83.783±7.29 483.881±16.85 136.443±64.71 30.802±9.63 35.916±12.60
ENSMUST00000114896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114897 144.710±39.51 75.117±12.95 87.484±8.96 99.381±47.69 75.028±19.74 62.543±9.73 N/A 259.438±57.90 144.224±52.43 33.356±1.61 N/A 136.745±76.74 134.107±72.94 48.304±19.20
ENSMUST00000130067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139810 N/A N/A N/A 270.698±0.00 N/A N/A N/A N/A N/A N/A N/A 371.152±0.00 308.628±145.40 145.351±0.00
ENSMUST00000145530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025782 ENSMUST00000026888 1.960±0.80 3.488±0.23 4.132±0.18 4.104±1.37 1.665±0.64 1.644±0.47 1.260±0.18 2.157±0.19 1.872±0.97 3.328±0.48 1.706±0.30 3.620±1.15 3.043±1.98 4.770±0.31
ENSMUST00000114906 N/A N/A N/A N/A 3.441±0.00 2.894±0.35 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114907 N/A N/A N/A N/A 2.655±0.00 N/A N/A N/A 0.721±0.00 N/A N/A 1.897±0.04 N/A N/A
ENSMUST00000114909 N/A N/A N/A N/A 0.479±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129720 0.667±0.00 N/A N/A N/A 0.801±0.17 0.939±0.32 N/A N/A 0.849±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000075534 ENSMUST00000149014 N/A N/A N/A N/A N/A N/A N/A 2.000±0.48 N/A N/A N/A N/A N/A N/A
ENSMUSG00000077733 ENSMUST00000104545 N/A N/A N/A 8.284±0.00 N/A N/A N/A N/A 8.203±1.61 N/A N/A 21.990±3.37 12.094±0.00 N/A

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