C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SCO cytochrome oxidase deficient homolog 2 (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000045555 sco2 7955 - 4:17521886-17523664 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000066988 sco2-201 17521939-17522805 protein_coding
  ENSDART00000150221 sco2-001 17521886-17523664 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000066988ENSDART00000150221
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000066988 N/A 0.707±0.00 N/A 0.275±0.00 N/A
ENSDART00000150221 3.189±3.09 4.854±0.70 6.526±0.00 0.296±0.00 2.380±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V1 CIL_0000V1_0001 CGP 4:17510172-17523664

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001654 ISS eye development
GO:0005507 IEA copper ion binding
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006825 IEA copper ion transport
GO:0006878 IEA cellular copper ion homeostasis
GO:0008535 IEA respiratory chain complex IV assembly
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000130489 SCO2 SCO2 cytochrome c oxidase assembly protein protein_coding Homo_sapiens
ENSMUSG00000091780 Sco2 SCO cytochrome oxidase deficient homolog 2 (yeast) protein_coding Mus_musculus

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