C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SCO cytochrome oxidase deficient homolog 2 (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000091780 Sco2 10090 - 15:89371639-89373818 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000167643 Sco2-201 89371639-89373818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000167643
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000167643 27.488±4.30 26.473±7.67 23.521±3.16 27.096±4.64 21.363±6.61 26.180±2.84 25.533±4.26 34.387±2.91 77.412±52.06 34.447±2.25 8.932±0.91 45.162±16.76 25.448±3.39 33.869±4.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026C CIL_00026C_0002 CGP 15:89351004-89372826
CIL_0000V1 CIL_0000V1_0003 CGP 15:89355719-89373818
CIL_00025U CIL_00025U_0002 CGP 15:89371639-89377039

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001654 ISS eye development
GO:0001701 IMP in utero embryonic development
GO:0003012 IMP muscle system process
GO:0005507 IEA copper ion binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006825 IEA copper ion transport
GO:0006878 IEA cellular copper ion homeostasis
GO:0008535 IMP respiratory chain complex IV assembly
GO:0014823 IMP response to activity
GO:0022904 IMP respiratory electron transport chain
GO:0030016 ISO myofibril
GO:0055070 IMP copper ion homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045555 sco2 SCO cytochrome oxidase deficient homolog 2 (yeast) protein_coding Danio_rerio
ENSG00000130489 SCO2 SCO2 cytochrome c oxidase assembly protein protein_coding Homo_sapiens

Loading