C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SCO2 cytochrome c oxidase assembly protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130489 SCO2 9606 - 22:50523568-50526439 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252785 SCO2-002 50523596-50525604 protein_coding
  ENST00000395693 SCO2-001 50523568-50525606 protein_coding
  ENST00000423348 SCO2-003 50524002-50526439 protein_coding
  ENST00000439934 SCO2-004 50524002-50526145 protein_coding
  ENST00000535425 SCO2-201 50523568-50526145 protein_coding
  ENST00000543927 SCO2-202 50523568-50526439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonMuscleOvaryTestisENST00000395693
Transcript ID Brain Colon Muscle Ovary Testis
ENST00000395693 4.511±2.13 6.675±0.00 5.240±0.00 11.482±0.00 7.768±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000V1 CIL_0000V1_0002 CGP 22:50508216-50526439
CIL_00025U CIL_00025U_0001 CGP 22:50523568-50530085

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001654 IMP eye development
GO:0001701 IEA in utero embryonic development
GO:0003012 IEA muscle system process
GO:0005507 NAS:IEA copper ion binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006825 IEA copper ion transport
GO:0006878 IEA cellular copper ion homeostasis
GO:0008535 IEA respiratory chain complex IV assembly
GO:0014823 IEA response to activity
GO:0022904 IEA respiratory electron transport chain
GO:0030016 IDA myofibril
GO:0055070 IEA copper ion homeostasis
GO:0055114 TAS oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045555 sco2 SCO cytochrome oxidase deficient homolog 2 (yeast) protein_coding Danio_rerio
ENSMUSG00000091780 Sco2 SCO cytochrome oxidase deficient homolog 2 (yeast) protein_coding Mus_musculus

Loading