C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytosolic thiouridylase subunit 2 homolog (S. pombe)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000051851 ctu2 7955 + 7:56556222-56588975 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000073555 ctu2-001 56556241-56588975 protein_coding
  ENSDART00000132852 ctu2-003 56577469-56588958 protein_coding
  ENSDART00000147539 ctu2-002 56556222-56563742 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000073555
Transcript ID Brain Heart Kidney Liver
ENSDART00000073555 1.820±1.01 1.373±0.79 2.362±2.93 1.288±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Y8 CIL_0000Y8_0001 CGP 7:56487218-56588975
CIL_0000Y5 CIL_0000Y5_0001 CGP 7:56556222-56778717

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 ISS tRNA binding
GO:0002098 ISS tRNA wobble uridine modification
GO:0005737 IEA cytoplasm
GO:0005829 ISS cytosol
GO:0008033 IEA tRNA processing
GO:0034227 ISS tRNA thio-modification

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000174177 CTU2 cytosolic thiouridylase subunit 2 homolog (S. pombe) protein_coding Homo_sapiens
ENSMUSG00000049482 Ctu2 cytosolic thiouridylase subunit 2 homolog (S. pombe) protein_coding Mus_musculus

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