C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytosolic thiouridylase subunit 2 homolog (S. pombe)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000049482 Ctu2 10090 + 8:122476143-122484138 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000116412 Ctu2-001 122476143-122483092 protein_coding
  ENSMUST00000128472 Ctu2-005 122476693-122478245 retained_intron
  ENSMUST00000131934 Ctu2-009 122480922-122481740 retained_intron
  ENSMUST00000134127 Ctu2-007 122476220-122479343 protein_coding
  ENSMUST00000136253 Ctu2-008 122480957-122481744 protein_coding
  ENSMUST00000146634 Ctu2-006 122476213-122478213 protein_coding
  ENSMUST00000149925 Ctu2-004 122476243-122478948 retained_intron
  ENSMUST00000151855 Ctu2-002 122476209-122484138 nonsense_mediated_decay
  ENSMUST00000154099 Ctu2-003 122476213-122481741 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091T CIL_00091T_0002 VISTA 8:122411841-123013825
CIL_0000Y8 CIL_0000Y8_0003 CGP 8:122466147-122484138
CIL_0000Y5 CIL_0000Y5_0003 CGP 8:122476143-122551329

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000049 ISS tRNA binding
GO:0002098 ISS tRNA wobble uridine modification
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005829 ISS cytosol
GO:0008150 ND biological_process
GO:0016779 IEA nucleotidyltransferase activity
GO:0032447 IEA protein urmylation
GO:0034227 ISS tRNA thio-modification
GO:0043234 IEA protein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051851 ctu2 cytosolic thiouridylase subunit 2 homolog (S. pombe) protein_coding Danio_rerio
ENSG00000174177 CTU2 cytosolic thiouridylase subunit 2 homolog (S. pombe) protein_coding Homo_sapiens

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