C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lipopolysaccharide-induced TNF factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000052666 litaf 7955 - 3:42778892-42784137 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000074561 litaf-001 42778892-42784137 protein_coding
  ENSDART00000142639 litaf-002 42780193-42783904 protein_coding
  ENSDART00000143344 litaf-003 42783402-42783903 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000074561ENSDART00000142639
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000074561 4.935±2.68 11.751±2.77 8.006±2.82 0.365±0.00 10.278±0.00
ENSDART00000142639 3.966±0.73 27.216±0.00 N/A 1.759±0.00 15.517±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043Q CIL_00043Q_0001 CGP 3:42774867-42784137
CIL_0007HQ CIL_0007HQ_0001 CGP 3:42778892-42796103

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000189067 LITAF lipopolysaccharide-induced TNF factor protein_coding Homo_sapiens
ENSMUSG00000022500 Litaf LPS-induced TN factor protein_coding Mus_musculus

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