C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007HQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052666-ENSDARG00000052667 CGP 7955 3:42778892-42796103
GeneTranscriptPositionBiotype
ENSDARG00000052666 (litaf)
lipopolysaccharide-induced TNF factor 		ENSDART00000074561 (litaf-001) 42778892-42784137 protein_coding
ENSDART00000142639 (litaf-002) 42780193-42783904 protein_coding
ENSDART00000143344 (litaf-003) 42783402-42783903 protein_coding
ENSDARG00000052667 (snn)
stannin 		ENSDART00000074564 (snn-201) 42795175-42795438 protein_coding
ENSDART00000147550 (snn-001) 42788541-42796103 protein_coding
CIL_0007HQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000189067-ENSG00000184602 CGP 9606 16:11547722-11679159
GeneTranscriptPositionBiotype
ENSG00000153066 (TXNDC11)
thioredoxin domain containing 11 		ENST00000283033 (TXNDC11-001) 11679080-11742878 protein_coding
ENST00000356957 (TXNDC11-002) 11679083-11742838 protein_coding
ENST00000570917 (TXNDC11-006) 11679083-11690097 processed_transcript
ENST00000571882 (TXNDC11-010) 11692050-11733999 nonsense_mediated_decay
ENST00000572732 (TXNDC11-004) 11690734-11692242 retained_intron
ENST00000573174 (TXNDC11-007) 11698134-11742794 processed_transcript
ENST00000575349 (TXNDC11-011) 11684235-11688568 retained_intron
ENST00000575591 (TXNDC11-009) 11691990-11736130 protein_coding
ENST00000576969 (TXNDC11-008) 11692014-11742547 nonsense_mediated_decay
ENSG00000184602 (SNN)
stannin 		ENST00000329565 (SNN-001) 11668414-11679159 protein_coding
ENSG00000189067 (LITAF)
lipopolysaccharide-induced TNF factor 		ENST00000339430 (LITAF-005) 11548000-11586373 protein_coding
ENST00000381810 (LITAF-201) 11548603-11556736 protein_coding
ENST00000413364 (LITAF-002) 11547999-11586950 protein_coding
ENST00000570798 (LITAF-009) 11549711-11586918 protein_coding
ENST00000570904 (LITAF-006) 11549107-11587247 protein_coding
ENST00000571277 (LITAF-013) 11556612-11586919 protein_coding
ENST00000571459 (LITAF-016) 11549312-11586903 protein_coding
ENST00000571627 (LITAF-012) 11549662-11598500 protein_coding
ENST00000571688 (LITAF-001) 11547722-11587563 protein_coding
ENST00000571976 (LITAF-008) 11553423-11586941 protein_coding
ENST00000572255 (LITAF-011) 11549602-11586919 protein_coding
ENST00000573332 (LITAF-015) 11549448-11586919 nonsense_mediated_decay
ENST00000574701 (LITAF-007) 11551773-11587289 protein_coding
ENST00000574703 (LITAF-004) 11556284-11586919 protein_coding
ENST00000574763 (LITAF-010) 11549626-11586919 protein_coding
ENST00000574848 (LITAF-019) 11556557-11636381 protein_coding
ENST00000575426 (LITAF-014) 11549360-11556444 nonsense_mediated_decay
ENST00000576036 (LITAF-017) 11549613-11629210 protein_coding
ENST00000576334 (LITAF-018) 11556722-11636377 protein_coding
ENST00000620789 (LITAF-202) 11551723-11586373 protein_coding
ENST00000622633 (LITAF-203) 11547726-11586950 protein_coding
CIL_0007HQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022500-ENSMUSG00000037972 CGP 10090 16:10959275-11074983
GeneTranscriptPositionBiotype
ENSMUSG00000022498 (Txndc11)
thioredoxin domain containing 11 		ENSMUST00000038424 (Txndc11-001) 11074911-11134650 protein_coding
ENSMUST00000118362 (Txndc11-002) 11085519-11134611 protein_coding
ENSMUST00000118679 (Txndc11-003) 11114063-11134613 protein_coding
ENSMUST00000131012 (Txndc11-005) 11088272-11122737 processed_transcript
ENSMUST00000145225 (Txndc11-006) 11087235-11134573 nonsense_mediated_decay
ENSMUST00000146081 (Txndc11-007) 11084752-11087352 processed_transcript
ENSMUST00000147884 (Txndc11-004) 11105957-11134650 nonsense_mediated_decay
ENSMUST00000148183 (Txndc11-008) 11075425-11084785 retained_intron
ENSMUST00000155221 (Txndc11-009) 11104611-11134553 nonsense_mediated_decay
ENSMUSG00000022500 (Litaf)
LPS-induced TN factor 		ENSMUST00000023143 (Litaf-001) 10959275-10993121 protein_coding
ENSMUST00000117360 (Litaf-002) 10960824-10975579 protein_coding
ENSMUST00000140170 (Litaf-003) 10966331-10993071 retained_intron
ENSMUST00000162323 (Litaf-004) 10963343-11066157 protein_coding
ENSMUSG00000037972 (Snn)
stannin 		ENSMUST00000089011 (Snn-201) 11066298-11074983 protein_coding
ENSMUSG00000093897 (Gm26268)
predicted gene, 26268 		ENSMUST00000177685 (Gm26268-201) 10965724-10965849 miRNA
ENSMUSG00000097056 (Gm4262)
predicted gene 4262 		ENSMUST00000180624 (Gm4262-201) 11008898-11015186 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007HQ_0001ENSDARG00000052666ENSDART00000074561ENSDART00000142639ENSDART00000143344ENSDARG00000052667ENSDART00000074564ENSDART00000147550CIL_0007HQ_0002ENSG00000153066ENST00000283033ENST00000356957ENST00000570917ENST00000571882ENST00000572732ENST00000573174ENST00000575349ENST00000575591ENST00000576969ENSG00000184602ENST00000329565ENSG00000189067ENST00000339430ENST00000381810ENST00000413364ENST00000570798ENST00000570904ENST00000571277ENST00000571459ENST00000571627ENST00000571688ENST00000571976ENST00000572255ENST00000573332ENST00000574701ENST00000574703ENST00000574763ENST00000574848ENST00000575426ENST00000576036ENST00000576334ENST00000620789ENST00000622633CIL_0007HQ_0003ENSMUSG00000022498ENSMUST00000038424ENSMUST00000118362ENSMUST00000118679ENSMUST00000131012ENSMUST00000145225ENSMUST00000146081ENSMUST00000147884ENSMUST00000148183ENSMUST00000155221ENSMUSG00000022500ENSMUST00000023143ENSMUST00000117360ENSMUST00000140170ENSMUST00000162323ENSMUSG00000037972ENSMUST00000089011ENSMUSG00000093897ENSMUST00000177685ENSMUSG00000097056ENSMUST00000180624
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007HQ_0001ENSDARG00000052666ENSDART00000074561ENSDART00000142639ENSDARG00000052667ENSDART00000074564ENSDART00000147550CIL_0007HQ_0002ENSG00000153066ENST00000283033ENST00000356957ENST00000570917ENSG00000184602ENST00000329565ENSG00000189067ENST00000339430ENST00000381810ENST00000413364ENST00000570904ENST00000622633CIL_0007HQ_0003ENSMUSG00000022498ENSMUST00000038424ENSMUST00000118362ENSMUST00000131012ENSMUST00000145225ENSMUST00000155221ENSMUSG00000022500ENSMUST00000023143ENSMUST00000117360ENSMUSG00000037972ENSMUST00000089011ENSMUSG00000093897ENSMUST00000177685ENSMUSG00000097056ENSMUST00000180624
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052666 ENSDART00000074561 N/A N/A N/A 4.935±2.68 N/A N/A 11.751±2.77 8.006±2.82 0.365±0.00 N/A 10.278±0.00 N/A N/A N/A
ENSDART00000142639 N/A N/A N/A 3.966±0.73 N/A N/A 27.216±0.00 N/A 1.759±0.00 N/A 15.517±0.00 N/A N/A N/A
ENSDART00000143344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000052667 ENSDART00000074564 N/A N/A N/A N/A N/A N/A 1.742±0.00 N/A N/A N/A 1.599±0.00 N/A N/A N/A
ENSDART00000147550 N/A N/A N/A 9.173±1.22 N/A N/A 0.851±0.52 0.306±0.00 0.329±0.00 N/A 1.960±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153066 ENST00000283033 9.944±0.00 13.461±0.00 2.425±0.00 N/A 5.720±3.21 2.267±0.00 5.769±0.00 11.352±2.79 2.933±0.00 12.114±4.42 6.110±4.85 6.202±5.30 11.093±1.63 5.342±3.23
ENST00000356957 N/A N/A N/A N/A N/A 1.280±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570917 N/A N/A N/A N/A N/A N/A N/A 5.142±0.00 8.598±0.00 N/A N/A 9.543±6.62 18.490±0.00 11.043±0.00
ENST00000571882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184602 ENST00000329565 31.354±0.00 19.735±0.00 1.352±0.00 39.886±29.40 18.740±16.25 7.270±6.06 5.470±4.50 6.345±4.09 3.525±0.21 14.924±11.90 25.667±0.00 8.012±6.17 5.615±0.78 5.800±3.66
ENSG00000189067 ENST00000339430 53.648±0.00 11.673±0.00 N/A 30.570±0.00 33.968±0.00 44.855±0.00 10.991±0.00 46.375±0.00 12.003±0.00 5.716±0.00 N/A 15.322±1.55 20.589±5.73 12.437±9.34
ENST00000381810 N/A N/A N/A N/A N/A N/A N/A N/A 8.309±0.00 N/A N/A N/A 12.115±0.00 1.945±0.00
ENST00000413364 N/A 8.577±0.00 18.065±0.00 2.657±0.00 16.017±0.00 17.692±0.00 0.768±0.00 8.685±0.00 3.812±0.00 15.764±0.00 N/A 8.564±3.33 6.936±0.90 N/A
ENST00000570798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570904 N/A N/A N/A N/A N/A N/A 2.013±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000571277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622633 21.180±0.00 20.626±0.00 N/A 4.425±3.31 8.567±3.65 7.596±3.78 4.304±0.00 12.127±6.33 7.494±2.11 33.532±29.02 4.080±1.67 32.900±32.86 13.232±10.04 5.957±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022498 ENSMUST00000038424 10.016±1.49 9.530±3.75 6.390±1.57 N/A 10.843±2.60 15.630±5.22 4.492±0.25 10.956±0.92 8.389±2.34 9.831±2.98 1.264±0.73 15.745±4.78 18.060±5.13 3.922±0.25
ENSMUST00000118362 3.383±0.00 N/A 2.075±0.00 N/A N/A N/A N/A N/A 1.926±0.54 N/A 0.396±0.08 3.408±0.14 3.668±1.28 N/A
ENSMUST00000118679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.406±0.00 N/A
ENSMUST00000145225 N/A 7.725±1.56 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.796±0.20 N/A N/A
ENSMUST00000146081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155221 N/A 28.441±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022500 ENSMUST00000023143 49.514±15.42 17.865±3.38 16.351±0.87 3.904±2.38 40.396±6.50 67.678±16.54 7.474±3.16 26.099±1.89 21.721±10.65 41.621±5.82 1.504±0.39 45.315±17.28 34.390±19.95 4.714±1.95
ENSMUST00000117360 26.338±3.03 62.933±2.51 N/A 1.501±0.00 39.437±4.14 113.404±21.31 5.219±0.00 13.301±3.20 28.944±10.78 17.410±4.38 N/A 49.852±12.19 N/A N/A
ENSMUST00000140170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037972 ENSMUST00000089011 22.411±2.07 11.629±2.47 11.232±1.78 72.900±20.82 31.781±11.60 6.665±0.78 11.207±0.29 33.202±1.93 3.228±0.82 28.925±2.50 2.020±1.33 18.240±3.95 4.686±1.45 9.668±4.88
ENSMUSG00000093897 ENSMUST00000177685 N/A N/A 81.276±62.07 143.696±0.00 N/A N/A N/A N/A 88.539±30.42 N/A N/A N/A 7.970±0.00 N/A
ENSMUSG00000097056 ENSMUST00000180624 0.351±0.08 0.071±0.02 0.525±0.20 0.318±0.37 0.143±0.05 1.026±0.34 0.073±0.03 0.115±0.08 0.137±0.10 0.903±0.14 0.044±0.01 1.093±0.33 0.511±0.26 0.113±0.05

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