C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000053101 prpf38b 7955 - 2:45710634-45719285 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000075080 prpf38b-001 45710634-45719285 protein_coding
  ENSDART00000131872 prpf38b-002 45711576-45719254 nonsense_mediated_decay
  ENSDART00000133598 prpf38b-003 45714715-45719245 processed_transcript
  ENSDART00000135665 prpf38b-004 45715275-45719242 processed_transcript
  ENSDART00000137126 prpf38b-005 45711484-45714086 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000075080ENSDART00000131872
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000075080 14.068±10.77 8.308±3.93 17.831±0.63 3.625±0.00 4.204±0.00
ENSDART00000131872 5.959±0.00 N/A N/A 2.417±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EP CIL_0007EP_0001 CGP 2:45698462-45719285

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000134186 PRPF38B pre-mRNA processing factor 38B protein_coding Homo_sapiens
ENSMUSG00000027881 Prpf38b PRP38 pre-mRNA processing factor 38 (yeast) domain containing B protein_coding Mus_musculus

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