C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007EP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000092813-ENSDARG00000053101 CGP 7955 2:45698462-45719285
GeneTranscriptPositionBiotype
ENSDARG00000053101 (prpf38b)
PRP38 pre-mRNA processing factor 38 (yeast) domain containing B 		ENSDART00000075080 (prpf38b-001) 45710634-45719285 protein_coding
ENSDART00000131872 (prpf38b-002) 45711576-45719254 nonsense_mediated_decay
ENSDART00000133598 (prpf38b-003) 45714715-45719245 processed_transcript
ENSDART00000135665 (prpf38b-004) 45715275-45719242 processed_transcript
ENSDART00000137126 (prpf38b-005) 45711484-45714086 processed_transcript
ENSDARG00000092813 (FNDC7 (8 of 8))
fibronectin type III domain containing 7 		ENSDART00000138179 (FNDC7 (8 of 8)-001) 45698462-45707715 protein_coding
CIL_0007EP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045326-ENSMUSG00000027881 CGP 10090 3:108853678-108911727
GeneTranscriptPositionBiotype
ENSMUSG00000027881 (Prpf38b)
PRP38 pre-mRNA processing factor 38 (yeast) domain containing B 		ENSMUST00000029480 (Prpf38b-001) 108902807-108911727 protein_coding
ENSMUST00000125208 (Prpf38b-006) 108904261-108905585 processed_transcript
ENSMUST00000127478 (Prpf38b-005) 108904476-108906118 processed_transcript
ENSMUST00000129273 (Prpf38b-003) 108902667-108911696 processed_transcript
ENSMUST00000145720 (Prpf38b-002) 108906561-108911710 processed_transcript
ENSMUST00000156808 (Prpf38b-004) 108904621-108907981 processed_transcript
ENSMUSG00000045326 (Fndc7)
fibronectin type III domain containing 7 		ENSMUST00000053065 (Fndc7-201) 108853678-108890008 protein_coding
ENSMUST00000102620 (Fndc7-001) 108855323-108890008 protein_coding
ENSMUST00000123018 (Fndc7-005) 108855833-108858613 processed_transcript
ENSMUST00000139137 (Fndc7-002) 108876512-108881779 protein_coding
ENSMUST00000147002 (Fndc7-003) 108862744-108870578 protein_coding
ENSMUST00000151713 (Fndc7-004) 108856088-108858609 processed_transcript
ENSMUST00000180063 (Fndc7-202) 108853678-108889706 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EP_0001ENSDARG00000053101ENSDART00000075080ENSDART00000131872ENSDART00000133598ENSDART00000135665ENSDART00000137126ENSDARG00000092813ENSDART00000138179CIL_0007EP_0002ENSMUSG00000027881ENSMUST00000029480ENSMUST00000125208ENSMUST00000127478ENSMUST00000129273ENSMUST00000145720ENSMUST00000156808ENSMUSG00000045326ENSMUST00000053065ENSMUST00000102620ENSMUST00000123018ENSMUST00000139137ENSMUST00000147002ENSMUST00000151713ENSMUST00000180063
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EP_0001ENSDARG00000053101ENSDART00000075080ENSDART00000131872ENSDARG00000092813ENSDART00000138179CIL_0007EP_0002ENSMUSG00000027881ENSMUST00000029480ENSMUST00000125208ENSMUST00000127478ENSMUST00000129273ENSMUST00000145720ENSMUST00000156808ENSMUSG00000045326ENSMUST00000053065ENSMUST00000102620ENSMUST00000123018ENSMUST00000139137ENSMUST00000147002ENSMUST00000151713ENSMUST00000180063
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000053101 ENSDART00000075080 N/A N/A N/A 14.068±10.77 N/A N/A 8.308±3.93 17.831±0.63 3.625±0.00 N/A 4.204±0.00 N/A N/A N/A
ENSDART00000131872 N/A N/A N/A 5.959±0.00 N/A N/A N/A N/A 2.417±0.00 N/A N/A N/A N/A N/A
ENSDART00000133598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000092813 ENSDART00000138179 N/A N/A N/A 0.169±0.04 N/A N/A 7.793±0.00 0.149±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027881 ENSMUST00000029480 7.163±1.99 10.621±0.47 19.855±0.06 16.218±5.19 4.343±0.76 4.924±0.99 2.772±0.61 5.823±1.03 12.880±11.00 9.198±1.07 2.903±0.54 18.185±7.01 14.915±2.58 8.901±6.62
ENSMUST00000125208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.637±0.00 N/A 144.298±0.00
ENSMUST00000127478 N/A N/A N/A 45.397±0.00 N/A N/A N/A N/A N/A N/A N/A 104.798±0.00 67.791±14.28 N/A
ENSMUST00000129273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.148±0.15 N/A N/A N/A
ENSMUST00000145720 10.323±2.33 63.321±25.35 N/A N/A 12.262±6.39 12.296±10.20 2.034±0.00 3.847±0.56 4.555±2.33 9.455±2.48 N/A 19.942±8.56 5.439±0.00 4.494±1.45
ENSMUST00000156808 N/A N/A N/A 35.183±0.00 N/A N/A N/A N/A N/A N/A N/A 87.481±0.00 41.969±11.15 N/A
ENSMUSG00000045326 ENSMUST00000053065 N/A 0.107±0.05 N/A 0.018±0.00 N/A 0.079±0.00 0.023±0.00 N/A 0.002±0.00 N/A N/A 1.577±0.00 N/A N/A
ENSMUST00000102620 0.181±0.11 0.151±0.04 0.089±0.00 0.003±0.00 0.384±0.07 0.159±0.09 0.031±0.02 0.097±0.05 0.025±0.01 0.630±0.14 0.019±0.00 14.550±5.27 0.060±0.04 0.238±0.07
ENSMUST00000123018 N/A 0.372±0.23 N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.403±0.00 0.269±0.15 1.719±0.00
ENSMUST00000139137 N/A N/A N/A N/A N/A 0.739±0.00 N/A 0.130±0.00 0.086±0.00 N/A 0.138±0.03 N/A N/A N/A
ENSMUST00000147002 N/A N/A N/A N/A 0.931±0.25 0.233±0.04 0.042±0.02 0.224±0.00 N/A N/A 0.051±0.00 N/A N/A N/A
ENSMUST00000151713 N/A 0.400±0.00 N/A 0.136±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.215±0.00 N/A
ENSMUST00000180063 0.023±0.00 N/A 0.011±0.00 0.024±0.00 0.122±0.07 N/A 0.045±0.00 0.036±0.02 0.004±0.00 0.258±0.04 0.023±0.01 4.548±1.67 0.047±0.03 0.036±0.02

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