C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000053205 ppfia4 7955 + 11:23207954-23415636 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000112567 ppfia4-001 23207954-23415636 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000112567
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000112567 3.997±0.00 1.558±0.18 0.082±0.00 0.043±0.00 0.526±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TW CIL_0000TW_0001 CGP 11:23196844-23415636
CIL_0000TV CIL_0000TV_0001 CGP 11:23207954-23432785

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000143847 PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 protein_coding Homo_sapiens
ENSMUSG00000026458 Ppfia4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 protein_coding Mus_musculus

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