C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho guanine nucleotide exchange factor (GEF) 1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000055837 arhgef1b 7955 - 16:28391679-28483195 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000087624 arhgef1b-201 28404313-28483195 protein_coding
  ENSDART00000124618 arhgef1b-202 28391680-28448140 protein_coding
  ENSDART00000139355 arhgef1b-001 28391679-28483195 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000087624ENSDART00000124618ENSDART00000139355
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000087624 N/A N/A N/A 0.254±0.00 N/A
ENSDART00000124618 1.793±0.10 6.704±1.17 8.389±0.00 N/A 2.016±0.00
ENSDART00000139355 4.548±0.38 2.569±0.88 13.616±0.00 0.840±0.00 0.816±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UK CIL_0003UK_0001 CGP 16:28383735-28483195

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005737 IEA cytoplasm
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0035556 IEA intracellular signal transduction
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000076928 ARHGEF1 Rho guanine nucleotide exchange factor (GEF) 1 protein_coding Homo_sapiens
ENSMUSG00000040940 Arhgef1 Rho guanine nucleotide exchange factor (GEF) 1 protein_coding Mus_musculus

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