C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sp8 transcription factor b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000056666 sp8b 7955 + 16:21491401-21496982 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000079201 sp8b-001 21493945-21496078 protein_coding
  ENSDART00000112147 sp8b-201 21491401-21496982 protein_coding
  ENSDART00000112894 sp8b-002 21493920-21496078 protein_coding
  ENSDART00000139357 sp8b-004 21494067-21495157 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000079201ENSDART00000112147ENSDART00000112894ENSDART00000139357
Transcript ID Brain Heart Kidney Muscle
ENSDART00000079201 N/A 0.027±0.00 N/A 0.033±0.00
ENSDART00000112147 0.933±0.75 N/A 0.087±0.02 N/A
ENSDART00000112894 0.692±0.00 N/A N/A N/A
ENSDART00000139357 0.378±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P2 CIL_0007P2_0004 UCNEbase 16:21155703-21492450

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003690 IDA double-stranded DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0030326 IMP embryonic limb morphogenesis
GO:0035118 IMP embryonic pectoral fin morphogenesis
GO:0045743 IMP positive regulation of fibroblast growth factor receptor signaling pathway
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000164651 SP8 Sp8 transcription factor protein_coding Homo_sapiens
ENSMUSG00000048562 Sp8 trans-acting transcription factor 8 protein_coding Mus_musculus

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