C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine/arginine-rich splicing factor 2a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000057484 srsf2a 7955 - 12:33407774-33413849 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000080173 srsf2a-001 33407774-33411488 protein_coding
  ENSDART00000132753 srsf2a-006 33408389-33410094 nonsense_mediated_decay
  ENSDART00000136278 srsf2a-002 33409713-33411444 retained_intron
  ENSDART00000137464 srsf2a-003 33409371-33411382 protein_coding
  ENSDART00000140550 srsf2a-004 33408551-33410207 nonsense_mediated_decay
  ENSDART00000146446 srsf2a-005 33407800-33409991 nonsense_mediated_decay
  ENSDART00000153056 srsf2a-008 33408464-33411299 protein_coding
  ENSDART00000153102 srsf2a-009 33407794-33411105 nonsense_mediated_decay
  ENSDART00000153174 srsf2a-007 33410982-33413849 protein_coding
  ENSDART00000153210 srsf2a-010 33407774-33408874 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000080173ENSDART00000132753ENSDART00000136278ENSDART00000137464
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000080173 54.212±0.00 23.904±6.53 20.767±7.15 5.855±0.00 22.771±0.00
ENSDART00000132753 N/A N/A 181.118±10.10 N/A N/A
ENSDART00000136278 N/A N/A N/A 4.134±0.00 N/A
ENSDART00000137464 102.292±35.56 N/A N/A 2.806±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000161547 SRSF2 serine/arginine-rich splicing factor 2 protein_coding Homo_sapiens
ENSG00000263465 SRSF8 serine/arginine-rich splicing factor 8 protein_coding Homo_sapiens
ENSMUSG00000034120 Srsf2 serine/arginine-rich splicing factor 2 protein_coding Mus_musculus

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