C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: caudal type homeobox 1 b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000058999 cdx1b 7955 - 21:42527977-42543419 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000081993 cdx1b-201 42527977-42543419 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000081993
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000081993 0.269±0.33 0.103±0.13 1.325±0.46 0.081±0.00 0.451±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000976 IEA transcription regulatory region sequence-specific DNA binding
GO:0001706 IMP endoderm formation
GO:0001889 IMP liver development
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0030855 IMP epithelial cell differentiation
GO:0031016 IMP pancreas development
GO:0043565 IEA sequence-specific DNA binding
GO:0045893 IGI positive regulation of transcription, DNA-dependent
GO:0048546 IMP digestive tract morphogenesis
GO:0050673 IMP epithelial cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000113722 CDX1 caudal type homeobox 1 protein_coding Homo_sapiens
ENSMUSG00000024619 Cdx1 caudal type homeobox 1 protein_coding Mus_musculus

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