C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription elongation factor, mitochondrial
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000059469 tefm 7955 + 6:19350192-19357889 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000082693 tefm-001 19350202-19355573 protein_coding
  ENSDART00000131033 tefm-201 19350296-19357889 protein_coding
  ENSDART00000151267 tefm-002 19350257-19352563 processed_transcript
  ENSDART00000151379 tefm-003 19350192-19352971 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000082693ENSDART00000131033
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000082693 1.501±0.51 2.731±0.09 1.565±0.00 0.195±0.00 1.894±0.00
ENSDART00000131033 1.295±0.53 1.338±0.21 1.440±0.24 0.200±0.00 0.641±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GS CIL_0004GS_0001 CGP 6:19347557-19365601

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005739 IEA mitochondrion
GO:0005759 ISS mitochondrial matrix
GO:0006119 ISS oxidative phosphorylation
GO:0006259 ISS DNA metabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006390 ISS transcription from mitochondrial promoter
GO:0030337 ISS DNA polymerase processivity factor activity
GO:0030529 ISS ribonucleoprotein complex
GO:0042645 ISS mitochondrial nucleoid
GO:0050790 ISS regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000172171 TEFM transcription elongation factor, mitochondrial protein_coding Homo_sapiens
ENSMUSG00000046909 Tefm transcription elongation factor, mitochondrial protein_coding Mus_musculus

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